Mycobacterium tuberculosis variant microti: RN08_3770
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Entry
RN08_3770 CDS
T04291
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mmic
Mycobacterium tuberculosis variant microti
Pathway
mmic03018
RNA degradation
mmic05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
mmic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RN08_3770
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
RN08_3770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmic03019
]
RN08_3770
03110 Chaperones and folding catalysts [BR:
mmic03110
]
RN08_3770
03029 Mitochondrial biogenesis [BR:
mmic03029
]
RN08_3770
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmic04147
]
RN08_3770
Enzymes [BR:
mmic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RN08_3770
Messenger RNA biogenesis [BR:
mmic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RN08_3770
Chaperones and folding catalysts [BR:
mmic03110
]
Heat shock proteins
HSP60 / Chaperonin
RN08_3770
Mitochondrial biogenesis [BR:
mmic03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RN08_3770
Exosome [BR:
mmic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RN08_3770
Exosomal proteins of other body fluids (saliva and urine)
RN08_3770
Exosomal proteins of breast cancer cells
RN08_3770
Exosomal proteins of colorectal cancer cells
RN08_3770
Exosomal proteins of bladder cancer cells
RN08_3770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AMC61197
LinkDB
All DBs
Position
complement(3811044..3812663)
Genome browser
AA seq
539 aa
AA seq
DB search
MSKLIEYDETARRAMEVGMDKLADTVRVTLGPRGRHVVLAKAFGGPTVTNDGVTVAREIE
LEDPFEDLGAQLVKSVATKTNDVAGDGTTTATILAQALIKGGLRLVAAGVNPIALGVGIG
KAADAVSEALLASATPVSGKTGIAQVATVSSRDEQIGDLVGEAMSKVGHDGVVSVEESST
LGTELEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLYQDKISSLPDLLPLLEKVAG
TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVN
PDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRAKHLRAEIDKSDSDWDR
EKLGERLAKLAGGVAVIKVGAATETALKERKESVEDAVAAAKAAVEEGIVPGGGASLIHQ
ARKALTELRASLTGDEVLGVDVFSEALAAPLFWIAANAGLDGSVVVNKVSELPAGHGLNV
NTLSYGDLAADGVIDPVKVTRSAVLNASSVARTVLTTETVVVDKPAKAEDHDHHHGHAH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagctgatcgaatacgacgaaaccgcgcgtcgcgccatggaggtcggcatggac
aagctggccgacaccgtgcgggtgacgctggggccgcgcggccggcatgtggtgctggcc
aaggcgtttggcggacccacggttaccaacgacggcgtcacggtggcacgtgagatcgag
ctggaagatccgtttgaagacttgggcgcccagctggtgaagtcggtggccaccaagacc
aacgatgtggccggtgacggcaccaccaccgcaaccatcttggcgcaggcactgatcaag
ggcggcctgaggctagtggccgccggcgtcaacccgatcgcgctcggcgtgggaatcggc
aaggccgccgacgcggtatccgaggcgctgctggcatcggccacgccggtgtccggcaag
accggcatcgcgcaggtggcgacggtgtcctcgcgcgacgagcagatcggtgacctggtt
ggcgaagcgatgagcaaggtcggccacgacggcgtggtcagcgtcgaagaatcctcgacg
ctgggcaccgagttggagttcaccgagggtatcggcttcgataagggcttcttgtcggca
tacttcgttaccgacttcgataaccagcaggcggtgctcgaggacgcgttgatcctgctg
taccaagacaagatcagctcgcttcccgatctgttgccattgctggaaaaggttgcagga
acgggtaagccactactgatcgtggctgaagacgtggagggcgaagcgttggcgacgctg
gtcgtcaacgcgattcgcaagacgttgaaagcggtcgcggtcaaggggccgtacttcggt
gaccgccgtaaggcgttccttgaggacctggcggtggtgacgggtggccaggtggtcaac
cccgacgccggcatggtgctgcgcgaggtgggcttggaggtgctgggctcggcccgacgc
gtggtggtcagcaaggacgacacggtcattgtcgacggcggcggcaccgcagaagcggtg
gccaaccgggcgaagcacttgcgtgccgagatcgacaagagcgattcggattgggatcgg
gaaaagcttggcgagcggctggccaaactggccggcggggttgctgtcatcaaggtgggt
gccgccaccgagaccgcactcaaggagcgcaaggaaagcgtcgaggatgcggtcgcggcc
gccaaggccgcggtcgaggagggcatcgtccctggtgggggagcctcgctcatccaccag
gcccgcaaggcgctgaccgaactgcgtgcgtcgctgaccggtgacgaggtcctcggtgtc
gacgtgttctccgaagcccttgccgcgccgttgttctggatcgccgccaacgctggcttg
gacggctcggtggtggtcaacaaggtcagcgagctacccgccgggcatgggctgaacgtg
aacaccctgagctatggtgacttggccgctgacggcgtcatcgacccggtcaaggtgact
aggtcggcggtgttgaacgcgtcatcggttgcccggacggtactcaccaccgagacggtc
gtggtcgacaagccggccaaggcagaagatcacgaccatcaccacgggcacgcgcactga
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