Methanobrevibacter millerae: sm9_0937
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Entry
sm9_0937 CDS
T04203
Name
(GenBank) DNA double-strand break repair protein Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mmil
Methanobrevibacter millerae
Brite
KEGG Orthology (KO) [BR:
mmil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmil03400
]
sm9_0937
DNA repair and recombination proteins [BR:
mmil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
sm9_0937
Archaeal homologous recombinant proteins
sm9_0937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
AAA_27
AAA_21
AAA_29
SbcC_Walker_B
BLOC1_2
ABC_tran
ABC_ATPase
MukB
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALT68726
UniProt:
A0A0U3DL84
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All DBs
Position
1040446..1043196
Genome browser
AA seq
916 aa
AA seq
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MIFKRLRLKNFKSYASEIINFDKGITVIVGENGAGKSSIFEAISFALFKQHTAGKIGDLV
RNNTENMSVELDFVSRGKEYRIIRDKTKSKTVSRLLTKTSSDSEFMSLCSGEREVSDNIQ
AILEMDANLFLNAIYVRQGEIAELVDKTPAEKKLLIGRLLGLDSLETAWNNMIPLIREYE
NKLSEIKGKLYSKDALKEEYETKSKELNALKSRGHELESQIEEVKNLISEISESKRDMER
EKEIYETQMNNLSNEKQTLERLEKDKHQLQENLDRIRESEAEIERLEKYVSKLDVYLDFE
KSVVSIQSLKESEIEIEDKIDSIKEQKHLIHAKKEGYNNYLKSDELITKLTNQKIDLEKE
LATITQLEKDKKKLLHSIESDRNDIEEFFSLSKEKLLDYGVSQDELAEVDDLKKLSDSTN
KLLEDISTKIEDLTNDINSKKENIVVFKQAIASAEKPLEELADVENKCPVCQSDIDDAKK
EELISQYKSDIEENTKSISETEETIRLFDKNKDSFKEKESKVKKLSEDILEYKYKFSNLQ
KDLQRLCEIDEGLDAKEYIGNKLGELILEIAREKENRESFKQDHEDYNKSKGALDVLGSQ
TEAEYKLKQIKNEIDVHVKNIKLAIENDPHLSGDMDNLELKQRIDDLKEKNEQYNQLKGF
VKNKNTVVSQFESVKEDIGVSNNQLEIIQNKINASTYDKEKYEQITYRDEMYSRRHESFT
NELSEIKGRARELINVHKSLAEKIKNNDRFQQEYDNISQYLVLLKDIRELYGKNGIQKEL
RNNSRPIIQKNTKKFFDDFNFNYSDLLLDEDYNVVVRGPEGESSMSMVSGGEKIAIALAL
RLGITKSMAKGDLETILLDEPTIHLDDARRQELINLLKEMSLLPQMIIVTHENQLESAAD
NLIKVEKENGISKIVN
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgatttttaaacgcttaagattaaagaatttcaaatcctatgcaagtgaaattattaat
tttgataagggaatcacagttatagtcggtgaaaatggtgccggtaaatcctcaattttt
gaagcaatcagctttgctttatttaaacagcacaccgcaggaaagataggtgatttggtt
agaaacaatactgaaaatatgagcgttgagcttgatttcgtatcaagaggaaaggaatac
aggataatccgtgacaagaccaaatccaaaacagtatccagacttctcaccaagacttca
agcgacagtgaattcatgtcattatgttccggagagcgagaagtgtcagacaacattcag
gcaatactggaaatggatgcaaatctctttttgaatgcaatttatgtgaggcagggtgaa
attgcagaacttgttgacaagactcctgcagaaaagaaactgttgattggaagattgctt
ggtcttgattcattggaaactgcctggaataatatgattccattaatcagagaatatgaa
aacaagctttcagaaataaaaggtaagttatattccaaggatgcattgaaagaggaatat
gaaaccaaatccaaggaattaaatgcattgaaatcaagaggtcacgaattggaatcacaa
attgaagaggttaaaaaccttataagtgaaatttccgaaagcaaacgtgatatggaacgt
gaaaaggaaatctatgaaactcaaatgaataatctctccaatgaaaagcagacacttgaa
agacttgaaaaggataagcatcagcttcaggaaaatcttgatagaatacgcgaatcagaa
gcggaaatcgaacgcctggagaaatatgtatccaaacttgatgtttaccttgactttgaa
aaatctgttgtcagcatccagtcattaaaagagtcagaaatcgaaattgaagataaaata
gattccataaaagaacagaaacatttgattcatgccaaaaaagaaggatataacaattat
ctaaaatcagatgaactaattactaaattgactaatcaaaaaatcgatttggagaaggaa
ttggctactatcactcaacttgaaaaggacaaaaaaaagcttttgcatagcatagaatct
gacaggaatgatattgaggaatttttctctctttcaaaagaaaaactcttggactatggt
gtttcacaggatgagcttgccgaagttgatgatttaaagaaattaagcgactctacaaat
aaattacttgaagacatttcaaccaaaatcgaagatctgactaatgacatcaattccaaa
aaggaaaatatcgttgtattcaagcaggctattgcctctgctgaaaagccattggaagaa
ttggccgatgttgaaaacaaatgtcctgtttgtcagtcagacattgatgatgctaaaaaa
gaggaactgatttcccagtataaaagtgacattgaggaaaataccaaatccatttctgaa
actgaagagacaatcaggctttttgacaaaaacaaggacagcttcaaggaaaaagaatcc
aaagttaaaaaattgtccgaagatattttggaatacaaatacaagttttccaaccttcaa
aaggacttgcagcgtttatgcgagattgatgaaggtttggatgcaaaggaatacatcgga
aacaagctaggtgaattgattttggaaattgcaagagaaaaggaaaatcgcgaaagcttc
aagcaagaccatgaggattataacaaatcaaaaggtgctttggatgttttaggcagccag
actgaagccgaatacaaactaaagcaaattaaaaatgagattgatgtccatgttaaaaac
atcaaattggctattgaaaacgaccctcatttaagtggggatatggataatcttgagctc
aagcagcgtattgacgatttgaaggaaaagaacgagcagtacaatcagctcaagggattt
gtcaaaaacaagaatactgtcgtttcccaattcgaatccgtcaaggaagacataggtgtt
tcaaacaatcagcttgaaatcatccagaataagataaatgcatcaacttatgataaggaa
aaatacgaacagattacttatcgtgatgagatgtattccagaagacatgaatcatttacc
aatgagctgtcagaaatcaagggaagggcaagagagcttatcaatgttcacaagtccctg
gctgaaaagatcaagaacaatgacagattccaacaggaatatgataacatttcacaatat
cttgttttgctaaaggatattcgtgaattatatggtaaaaacggaatccaaaaagaattg
aggaataattcaagacctatcatccagaaaaacactaaaaaattctttgatgattttaac
ttcaactattctgatttgctcttggatgaggattataatgttgttgtaaggggtcctgaa
ggtgaatccagcatgtcaatggtcagtggtggtgaaaaaatagctattgcattggcttta
agattaggtatcactaagtcaatggctaaaggtgatttggaaactatcctcctggatgaa
cctacaattcatttggatgatgccagaagacaggaattaatcaatctgttaaaagagatg
tcactgcttcctcaaatgattatagtaactcacgaaaatcagttggaaagtgctgcggat
aatctcattaaggtagaaaaagaaaatggaatttcaaaaatagtaaattaa
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