Methanobrevibacter millerae: sm9_1576
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Entry
sm9_1576 CDS
T04203
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mmil
Methanobrevibacter millerae
Pathway
mmil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
sm9_1576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmil03019
]
sm9_1576
03009 Ribosome biogenesis [BR:
mmil03009
]
sm9_1576
Enzymes [BR:
mmil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
sm9_1576
Messenger RNA biogenesis [BR:
mmil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
sm9_1576
Ribosome biogenesis [BR:
mmil03009
]
Prokaryotic type
rRNA helicases
sm9_1576
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
Cas3-like_C_2
Helicase_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ALT69344
UniProt:
A0A0U3E8R8
LinkDB
All DBs
Position
complement(1756197..1757468)
Genome browser
AA seq
423 aa
AA seq
DB search
MNFNDLKINDDIKSAVGKMGFEKLTPIQKKAIPEALAGKDIIGQAQTGSGKTFAFAIPIL
NKIFTPDKSPQAIILCPTRELCIQVAEEFKKLSWDMDKVKILAVYGGQAIGRQIRVLNKG
VHVVVGTPGRVIDHIERGTLDLIGVETVVLDEADEMLDMGFRDDIELILRHTPKQRQTLL
FSATMRDEIKKITKLYQNNPKFIKISDSRKTIPKIKQFSFKSDDRDKIDDLCKIIEYYDF
NLWLIFCNTRRRVDFVYRNLKRNGFKVDSIHGDMTQKVRDKVMNKFRNGNISILVASDIA
ARGIDVTEIDVVVNYDIPQNPEDYIHRIGRTARAGESGYAFNIVAPYESHDLVKIRKKFN
LNIKSKKVPSRDEIERIKNKEVLDDVRVLIENNDLENYVNVITSSKMDATEIAAALLKMI
REK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaatgatttaaaaataaatgatgacattaaaagtgctgtcggtaaaatgggg
tttgaaaagttaactccaattcaaaaaaaagcaattcctgaagcattagcaggaaaagac
attatcggtcaggcacaaacaggttccggcaagacttttgcctttgctataccaatactg
aacaagatttttactccggacaagtcacctcaggccattatactctgtcctacacgtgaa
ctgtgcatccaggttgcagaagagtttaagaaattgtcctgggatatggataaggtaaag
atattggcggtttatggtggtcaggctatcggaaggcagattcgcgtattgaacaaggga
gttcatgttgttgttggaactcctggccgtgttattgaccatattgaaaggggaactctt
gatttgattggtgttgaaacagttgttctggatgaagctgatgaaatgttggacatggga
tttagggatgacattgaactgattttaaggcacactccaaagcaaagacagactttactc
ttttctgcaacaatgagggatgaaatcaaaaaaatcaccaagctgtatcagaataatccg
aaatttataaaaatttcagattcaagaaaaacgattcctaaaataaagcagttctctttt
aaaagtgatgaccgggataaaattgatgatttatgtaagattattgaatattatgacttt
aatctctggctgatattctgcaatactcgccgcagggtggattttgtttatcgaaatctt
aaaagaaacggctttaaggtagacagcattcatggtgacatgacccaaaaagtcagggat
aaggtaatgaacaagtttcgaaacggcaacatatcgattcttgtagcaagcgacattgca
gcccgtggaattgacgtaactgaaattgatgttgtcgtcaattatgacattcctcaaaat
cctgaagattacattcacagaatcggacgaacagcccgtgcaggtgaatccggatatgcg
ttcaatattgtggctccgtatgaatcacatgacttggttaaaatcagaaaaaaattcaat
ttaaatattaaaagcaagaaagttccaagccgtgatgaaatcgagagaataaaaaataaa
gaagttttggatgatgttcgtgtattgattgaaaataatgatttggaaaattacgttaat
gtcataacatcttccaaaatggatgctactgaaattgccgcagcattgttaaaaatgatt
agggaaaaataa
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