Methanobrevibacter millerae: sm9_1651
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Entry
sm9_1651 CDS
T04203
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D RpoD
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mmil
Methanobrevibacter millerae
Pathway
mmil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
sm9_1651 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmil03021
]
sm9_1651 (rpoD)
Enzymes [BR:
mmil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
sm9_1651 (rpoD)
Transcription machinery [BR:
mmil03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
sm9_1651 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4_7
RNA_pol_L_2
Fer4_10
Fer4_9
Motif
Other DBs
NCBI-ProteinID:
ALT69418
UniProt:
A0A0U3DTX3
LinkDB
All DBs
Position
complement(1848923..1849747)
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AA seq
274 aa
AA seq
DB search
MEIEVKSQSDDEIVFIVRDAEVPFVNAIRRTAMVNVPKIAIEDVNIIKNDSAMFNEVLAH
RLGLTPLVSDLDAIEGLLLPEDDGWYEPQGIAFRLNEVGPKVVYSKDLISSDSKIKPVYD
TIPIVKLKEDEELIVEAYAKVGYGKNHVKWMPTTVCAYKQYPEITFNDEVDIDYDCADAC
PRGVLKSDKRSKNIKILDIENCSMCKSCVRSSINRAAANGAPDKSYINVGYRENDFIFRI
ETDGSMPPKEVLLTACDKLGEKADKFISFSEKEE
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggagatagaagtaaaaagtcaaagcgatgatgaaattgtattcattgttcgtgatgca
gaagtaccttttgtaaatgctattagaaggacagcaatggttaatgttcctaaaatagct
attgaagatgtgaatattattaaaaatgattctgctatgtttaatgaggtacttgctcat
aggcttggtttaactcctttagtgtctgatttggatgctattgaaggcttattattgcct
gaagatgatggttggtatgaacctcaaggtattgcattccgtttaaatgaagttggacct
aaggtagtttattctaaggatttaatatcttcagactcaaaaattaaaccagtatacgat
acaattcctattgttaaacttaaagaagatgaagaacttattgtggaagcttatgcaaaa
gtaggttatggtaaaaaccatgttaaatggatgccaaccactgtttgtgcttataaacaa
tatccggaaattactttcaacgatgaagtagacattgattatgactgtgctgatgcatgt
ccaagaggtgtcttaaaatccgataaaagatctaaaaacattaaaattttagacattgaa
aattgttccatgtgtaaaagttgtgtaaggtcttctatcaatcgtgctgctgcaaacgga
gcacctgacaaaagttatattaacgtaggatatcgtgaaaatgatttcatatttagaatt
gaaactgatggatcaatgccccctaaggaagtattattaacagcttgtgataagttaggt
gaaaaagcagataaatttatcagttttagtgagaaggaggagtaa
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