Methanobrevibacter millerae: sm9_1860
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Entry
sm9_1860 CDS
T04203
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A' RpoA1
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mmil
Methanobrevibacter millerae
Pathway
mmil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
sm9_1860 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmil03021
]
sm9_1860 (rpoA1)
Enzymes [BR:
mmil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
sm9_1860 (rpoA1)
Transcription machinery [BR:
mmil03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
sm9_1860 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
DUSP
Motif
Other DBs
NCBI-ProteinID:
ALT69626
UniProt:
A0A0U3DUG1
LinkDB
All DBs
Position
complement(2042983..2046444)
Genome browser
AA seq
1153 aa
AA seq
DB search
MKEFIKKIERINFGLMSPEDIRKMSVVRVETPDTYDSDGYPIENGLMDPRLGVLDPSLRC
HTCGVRGGDCQGHFGSIELARPVLHVGFGDIIHKILRSTCNHCGRVLLPEDVLDDYREKL
ADAVNHKENLEDILKKIQNEAKKVEMNENKQNDLVDKIMSEIYPEKDDEYDDADRQDILL
NILNQLYAEAYMERDETEEKHSFKYIDPKQLCPHCRKNQSLEDIEASYDIIETKNTADIE
SIKENIRANIDDEYTKKIEKIDKKLAEDISSEEVEKLEEERAKLVEEQELKSDKKFSNEF
KRRIRDYIKAYIQDLVQESIVLDKPTTISQGEYKLTASEIRERLERINDEDIYVLGINPE
VARPEWLVLTVLPVPPVTVRPSITLDTGERSEDDLTHKLVDILRINQRLVENMEAGAPQL
IVEDLWDLLQYHVTTYFDNEASGVPPSKHRSGRPLKTLTQRLKGKEGRFRSNLSGKRVNF
SARTVISPDPNISINEVGVPEMIAKEVTVPAYVNDWNIDEIKTYIENGPDVHPGANYMIT
ESGNRRKINEDTKEFILENLKPGDIVERHLKDGDMVLFNRQPSLHRMSMMAHEVRVLPYK
TFRLNLCVCPPYNADFDGDEMNMHVFQTDESRAEAKSLMRVQEHILSPRFGGPIIGAIHD
HISGAYLLTRKTMKFTEEQALQIVRKSHLPIPQNDGEKWILKAESQESPEIEREIAKKTK
NVRGTKADKEVYLNTLDLTEDEIAKRLKANKWDDEEKETIKNIAKKRIADEIAAKYSSDA
EDNSDSLIIKNNGDEWTGKELFSLLLPNNLNLTYKAEICTKCGQCDKILREAPDPSVVDY
DKLCPIDAYVMIENGILKHGVIDEKAYGSMSGQILDKIVKEYGPGRAKEFLDRSTDLAIC
GIMVTGITTSLNDEEIPEEAQARINEHLQKSEEKVDRLIDAYNEGILDALPGRSLEETLE
MRIMQVLGEARDKSGEIAEDYLTMEHNHSVVMARTGARASMLNLTQITSCVGQQAVRGGR
IHRGYIERTLPHFKRNELGAKAKGFVHSSYKSGLDPIEFFFHAMGGREGLVDTAIRTAQS
GYMQRRLVNALQDLQVKPSGLVTDNQSNVVQRIFGDDGVDPAKSDFGIAANLDKLIEEIK
LEEKSNEISQVGK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaatttatcaaaaaaattgaaagaattaactttggattaatgtctccagaagat
attcgtaaaatgtctgttgttcgtgtagaaactccagatacttatgactctgatggttat
ccaattgaaaatggtttaatggatcctcgtttaggtgttttagatccttctttaagatgt
cacacttgtggtgtcagaggtggggattgtcaaggacactttggtagtattgaacttgca
agacctgttcttcatgttggttttggagatattattcacaagattttacgttctacttgt
aatcactgtggtcgtgttctcttgcctgaggatgttttagatgactacagggaaaaactt
gctgatgcagtaaatcataaagaaaacttggaggatatcttaaaaaagattcaaaatgaa
gctaaaaaagttgaaatgaatgaaaacaaacaaaatgatcttgttgataaaatcatgagt
gaaatctatcctgaaaaggatgatgagtatgatgatgcagatagacaggatattttgttg
aatattttgaaccaactttatgctgaagcatatatggaaagggatgaaactgaagagaaa
cattcattcaagtacatcgacccaaaacagctttgtcctcattgtaggaaaaaccaatct
ttggaagatatcgaagcaagctatgatataatcgaaacaaaaaatactgcggatattgaa
tccatcaaagaaaatatccgtgcaaatatcgatgacgaatacactaaaaaaatagaaaaa
atcgataaaaaacttgctgaagatattagcagtgaagaagttgaaaaattagaagaagaa
agggctaaattagttgaagaacaagaattaaaatctgataagaaattcagcaacgaattt
aaaagacgtatcagagattatatcaaagcatatattcaagatcttgttcaggaatccatt
gttttggataagcctactactatcagccaaggtgaatataagttaaccgcttctgaaatc
agggaaaggctcgaaagaatcaatgatgaagatatatatgtattaggtatcaatcctgaa
gttgctagacctgaatggttagttttaactgttttacctgttcctccagtaactgttaga
ccttctattactttggatactggtgaacgttcagaagatgacttgactcacaagcttgta
gatattttacgtattaatcaaagattagttgaaaatatggaagcgggtgctccacaatta
attgttgaagatttatgggatttattacaatatcatgttaccacttactttgataatgag
gctagtggtgttccaccatccaaacataggtcaggcagaccattaaaaaccttaactcaa
aggttaaaaggaaaagaaggaagattcagatcaaacctttctggtaaacgtgtaaacttt
tcagcacgtactgtaatttctcctgatccaaatatcagtattaatgaagttggtgttcct
gaaatgattgcaaaagaggtaaccgtacctgcttatgtaaatgactggaacatcgatgaa
atcaaaacatatattgaaaacggtcctgatgtacaccctggtgctaattatatgattacc
gaatcaggaaacagaaggaaaatcaatgaggatacaaaagaatttatccttgagaattta
aaacctggtgatattgtagaaagacatttgaaagatggagatatggttttattcaatcgt
caaccttctcttcacagaatgagtatgatggcacacgaagtaagggtattgccttacaaa
actttcaggttaaacttatgtgtatgtcctccatacaatgcagacttcgatggagacgaa
atgaacatgcacgttttccaaactgatgaatcccgtgcagaagcaaaatcattaatgcgt
gtacaagagcacattttatctccaaggttcggtggaccaattatcggtgcaattcacgac
cacatttctggagcatatctgttaacaagaaaaacaatgaaattcactgaagaacaagca
ttgcaaattgttcgtaaatcacatttaccaatacctcaaaacgatggggaaaaatggatt
ttaaaagcggaatctcaagaaagcccggaaattgaaagagaaattgctaaaaagactaaa
aatgtccgtggaactaaagcagataaggaagtttatcttaacactttagatttaactgaa
gatgaaatagctaaacgtctcaaagcaaacaaatgggatgatgaagaaaaagaaaccatt
aaaaacattgcaaagaaacgtattgctgatgaaatcgctgctaaatattcatcagatgct
gaagataactctgattcacttataattaaaaataatggtgatgagtggactggtaaagag
ttattctcattactcttaccaaataacttaaacttaacttataaagctgaaatttgtact
aaatgtggtcaatgtgacaaaattttaagagaggcacctgacccatcagttgtcgattat
gataaattatgtcctattgatgcttatgttatgattgaaaatggtatcttaaaacatgga
gtaatcgatgaaaaagcatatggatccatgtctggtcaaattttggataaaatagttaaa
gaatatggtcctggaagagctaaagaattcttagacagatcaactgacttagctatctgt
ggaatcatggtaactggtatcaccaccagtctaaacgatgaagaaattcctgaagaagct
caagcaaggattaatgagcatttacaaaaatctgaagaaaaagtagatagattaattgat
gcatataatgaaggtattcttgatgctttgccgggtagaagtttagaagaaactttggaa
atgagaatcatgcaagttctcggggaagctagggataaatctggtgaaattgcagaagat
tacttgactatggaacacaatcactctgttgtcatggcacgtaccggtgctagggcatcc
atgttgaacttgactcagattacttcctgtgtaggtcaacaggcagttaggggtggacgt
atccacaggggttacattgaaagaacattgcctcacttcaaaagaaacgaattaggggca
aaagcgaaaggatttgtacattcaagttataaatctggacttgacccaattgaattcttc
ttccacgcaatggggggaagagaaggtcttgtagatactgcgattcgtacagcacaatca
ggttatatgcaaagaagacttgtaaacgcacttcaagacttgcaggtaaaaccatccgga
cttgtaactgataatcaaagtaatgttgttcaaagaatctttggtgacgatggagtagat
ccggctaaaagtgactttggtatagcagcaaacttagacaaactcattgaagagattaaa
ttagaagaaaaatctaatgaaatatctcaggtaggtaaataa
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