Methanobrevibacter millerae: sm9_2158
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Entry
sm9_2158 CDS
T04203
Symbol
tbp
Name
(GenBank) TATA-box binding protein Tbp
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mmil
Methanobrevibacter millerae
Pathway
mmil03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
sm9_2158 (tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmil03000
]
sm9_2158 (tbp)
03021 Transcription machinery [BR:
mmil03021
]
sm9_2158 (tbp)
Transcription factors [BR:
mmil03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
sm9_2158 (tbp)
Transcription machinery [BR:
mmil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
sm9_2158 (tbp)
RNA polymerase III system
TFIIIB
sm9_2158 (tbp)
RNA polymerase I system
SL1/TIF-1B
sm9_2158 (tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
ALT69914
UniProt:
A0A0U3DVA5
LinkDB
All DBs
Position
complement(2356008..2356553)
Genome browser
AA seq
181 aa
AA seq
DB search
MTDVDIKIENIVASASIGKDIVLTDVSQALEGVNFNREQFPGLVFKLKDPKTAALIFSSG
KLVCTGAKSIDDSKLAIKKTVDLMREVDTEIPHEFEIKIQNIVASANLQSTLNLEAVALE
LEDTEYEPEQFPGLVYRLSDPKVVLLLFGSGKVVCTGAKTKSDAKLGVERAYDRLSELDL
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgatgttgacattaaaatagaaaacattgtagcttccgcaagcattggcaaggac
attgtcctgactgatgtgtcccaagctttagaaggggttaattttaatcgtgaacagttt
ccgggattagttttcaaacttaaagatcctaaaaccgcagcgttaatcttcagctctggt
aagcttgtttgtactggagcaaaatctatagatgattccaaattggcaatcaagaaaact
gtagatttgatgagggaagtagatacagaaattcctcacgaatttgaaattaaaattcaa
aatattgtggcatctgcaaatttgcaatccacattaaatttagaagcagtagctttagaa
cttgaggataccgaatatgaacctgaacaatttcctggtttagtatacagattatctgat
cctaaagttgtgctattattgtttggttccggtaaagttgtttgtactggagcaaaaaca
aaaagcgacgctaaattaggcgtcgaaagagcttacgatagattaagtgagctagattta
atataa
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