KEGG   Methanobrevibacter millerae: sm9_2158
Entry
sm9_2158          CDS       T04203                                 
Symbol
tbp
Name
(GenBank) TATA-box binding protein Tbp
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
mmil  Methanobrevibacter millerae
Pathway
mmil03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mmil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    sm9_2158 (tbp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmil03000]
    sm9_2158 (tbp)
   03021 Transcription machinery [BR:mmil03021]
    sm9_2158 (tbp)
Transcription factors [BR:mmil03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    sm9_2158 (tbp)
Transcription machinery [BR:mmil03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     sm9_2158 (tbp)
  RNA polymerase III system
    TFIIIB
     sm9_2158 (tbp)
  RNA polymerase I system
    SL1/TIF-1B
     sm9_2158 (tbp)
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-ProteinID: ALT69914
UniProt: A0A0U3DVA5
LinkDB
Position
complement(2356008..2356553)
AA seq 181 aa
MTDVDIKIENIVASASIGKDIVLTDVSQALEGVNFNREQFPGLVFKLKDPKTAALIFSSG
KLVCTGAKSIDDSKLAIKKTVDLMREVDTEIPHEFEIKIQNIVASANLQSTLNLEAVALE
LEDTEYEPEQFPGLVYRLSDPKVVLLLFGSGKVVCTGAKTKSDAKLGVERAYDRLSELDL
I
NT seq 546 nt   +upstreamnt  +downstreamnt
ttgaccgatgttgacattaaaatagaaaacattgtagcttccgcaagcattggcaaggac
attgtcctgactgatgtgtcccaagctttagaaggggttaattttaatcgtgaacagttt
ccgggattagttttcaaacttaaagatcctaaaaccgcagcgttaatcttcagctctggt
aagcttgtttgtactggagcaaaatctatagatgattccaaattggcaatcaagaaaact
gtagatttgatgagggaagtagatacagaaattcctcacgaatttgaaattaaaattcaa
aatattgtggcatctgcaaatttgcaatccacattaaatttagaagcagtagctttagaa
cttgaggataccgaatatgaacctgaacaatttcctggtttagtatacagattatctgat
cctaaagttgtgctattattgtttggttccggtaaagttgtttgtactggagcaaaaaca
aaaagcgacgctaaattaggcgtcgaaagagcttacgatagattaagtgagctagattta
atataa

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