Methanobrevibacter millerae: sm9_2254
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Entry
sm9_2254 CDS
T04203
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
mmil
Methanobrevibacter millerae
Pathway
mmil03030
DNA replication
mmil03420
Nucleotide excision repair
mmil03430
Mismatch repair
mmil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
sm9_2254
03420 Nucleotide excision repair
sm9_2254
03430 Mismatch repair
sm9_2254
03440 Homologous recombination
sm9_2254
03460 Fanconi anemia pathway
sm9_2254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmil03000
]
sm9_2254
03032 DNA replication proteins [BR:
mmil03032
]
sm9_2254
03400 DNA repair and recombination proteins [BR:
mmil03400
]
sm9_2254
Transcription factors [BR:
mmil03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
sm9_2254
DNA replication proteins [BR:
mmil03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
sm9_2254
DNA repair and recombination proteins [BR:
mmil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
sm9_2254
MMR (mismatch excision repair)
sm9_2254
DSBR (double strand breaks repair)
HR (homologous recombination)
sm9_2254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Rep_fac-A_C
OB_MEIOB_N
SHLD2_OB1
HIN
DUF5088
Motif
Other DBs
NCBI-ProteinID:
ALT70010
UniProt:
A0A0U3DVJ2
LinkDB
All DBs
Position
complement(2458600..2461209)
Genome browser
AA seq
869 aa
AA seq
DB search
MEKEILEQYNKVKDILSEEEFLNEIEQIRPNFEDLPFMDEVDIAKEVVKNHIGAADISKS
EDSIDDADSSFEKVVMTNELLEKYNQIKDYMSEDEFLDEMNKLKKENSDVSFMNEETFAD
QIVGRYVESENEILTEREEYSSDNIGLLEDGDKDKSFTGVVKTISNPRSFKTRKGNSGKV
CNVDVEDKTGKIRVVLWTENIKHLKNISEGDIVHVGGVDIKDGYSGLEASMRPRSVFEKA
VDADPSDYPTYTEEITPIKDVQANTTVNVIARITRIPPVRTYNKNGKDGKVASLELQDAS
GTISYTLWNNNVDLIQSLELNDGDTVKILQAQVRERNDEKSLSHWDGRIIKGDFDVPEFE
HEVSKIGDLDDGDSDISIIGVVTKLQDIRKFIRKSDKSEGQLRNFNITDDTGSIRVTLWG
ESADIEIKKGDIVKLIGGTVVYDEYTEEGHSINTNFSTQISVNPKNLSEDDELIFNNIKE
KLQPMQIEQVVLGDEENIDVDVMGRIMSVGDIRTFERPSDGSQGKVRSASFSDGTEVIQL
SLWDDKTNVDLDVGNAYLLENARVRFSMDSISLNIGSSSRVISLSEDQAKFLPSFETLEK
MIYEYREISDLDEYDENIYVVGRIFEVFDVRELERDDGSKYLLRNIEIADNSQAIRVSLW
GENAKREFDEGEAIKIQNPRIDLYNDQLTLNIAESTAIVKPSDEELMNLPSFDELKEAIY
VPKEIEAIEDNDVNVRVTGTLQDIVSERLLLRKCPHCSNTIGDVELDGETMCDFCGETFD
EPRTTLMIPTTLVDDTGDIGVTFFDNLVEDLLEMPREEIINIVTDDPGALDGRIEDLEGL
TVEIIANVSYDEYNEVRKLNPRKILQKYY
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaaattttagaacaatacaataaagtcaaagatatactctctgaagaagaa
tttttaaatgaaatagagcaaattcgtccaaattttgaagatttgccttttatggatgag
gtagacattgcaaaagaagttgttaagaatcatattggtgcagctgatatttcaaaatct
gaagattctattgatgatgcagattcttcatttgaaaaagttgtaatgactaacgaactt
ttagaaaaatataatcagattaaagattatatgagtgaagatgaatttttggatgaaatg
aataaactcaaaaaagaaaattcagatgtatcttttatgaatgaagaaactttcgctgat
caaattgttggcagatatgttgaaagcgaaaacgaaattttaaccgaaagggaagaatat
tccagcgacaatattggattactggaagatggtgataaagacaaatctttcactggtgtt
gttaaaacaatcagcaatccaagatcatttaaaacacgtaaaggaaactctggaaaagtg
tgtaatgttgatgttgaagataaaacaggaaaaattcgtgttgtcctatggacagaaaac
atcaaacatttaaaaaatatttctgaaggagatattgtccatgttggtggagttgatatt
aaagatggttattctggtcttgaagcttcaatgagacctagatctgtttttgaaaaagca
gttgatgctgatccttcagattatccaacatatactgaagaaattactccaatcaaagat
gttcaggccaatacaacagtaaatgttattgcaagaattactagaattcctcctgttaga
acatataataagaatggtaaggatggaaaagttgcatcattggaacttcaggatgcatct
ggaacaatctcatatactttatggaataataatgttgatttaattcaatctcttgaatta
aacgatggcgataccgtaaaaattcttcaagctcaagtaagagaaagaaacgatgaaaaa
tctttaagtcattgggatggaagaataattaaaggggactttgatgttccagaatttgag
catgaggtttcaaaaatcggtgatttggatgacggagacagtgatatttcaataattggt
gttgtaactaagttgcaggatatcagaaaattcattagaaaatctgataaaagtgaaggc
caattaagaaatttcaatattacagatgatactgggtccattagggtcactttatgggga
gaaagtgcagatattgaaattaaaaaaggagatattgtaaaattaattggtggaactgtt
gtctatgatgaatatactgaagagggtcattctattaatacaaatttctcaactcaaata
tctgtcaatcctaaaaacttatcagaagatgatgaattaattttcaacaatatcaaagag
aaattacagccaatgcaaatcgaacaagttgtattgggtgatgaagagaatattgatgtt
gatgtaatgggtaggataatgtctgtcggcgatataaggacttttgaaagaccatccgat
ggttctcaaggtaaagttcgttcagcatcattttctgatggtactgaagtaattcaatta
tcattatgggatgacaaaaccaatgttgatttggatgttggaaatgcatatctgcttgaa
aatgcaagagtaagatttagcatggattcaattagtttaaacattggctcatcttcaaga
gttattagtttatcagaagatcaagctaaatttttaccatcattcgagacattagaaaaa
atgatttatgaatatcgtgaaatttcagatttagacgaatatgatgaaaatatttatgtt
gttggaagaatctttgaggtatttgatgttcgtgaattagaaagagatgacggtagtaaa
tacttactaagaaatatagaaattgctgataattctcaagctatcagagtatcattgtgg
ggagaaaatgctaaaagagaatttgatgaaggagaagctattaaaattcaaaatcctagg
atagatttatataatgaccaattgactttaaatattgctgaatctactgctattgttaaa
ccaagcgatgaagagttaatgaacttaccttcatttgatgaactcaaagaagcaatttat
gttccaaaagaaattgaagcaatagaagataatgatgttaacgttcgtgttaccggaact
cttcaggatattgtctctgaaagattacttctcagaaaatgtccgcattgttctaatact
attggtgatgttgaacttgatggagaaacaatgtgtgatttctgtggtgaaacatttgat
gaaccaagaaccactcttatgattccaacaactttagttgatgatactggtgatataggt
gttacattctttgataatttagttgaagatttattagaaatgcctagggaagaaattatc
aatatagttactgatgatcctggagctttagatggaagaattgaagacttagaaggtctc
actgtagaaattattgcaaatgttagctatgatgaatataatgaagttagaaaactcaac
ccaagaaaaattttacaaaaatattactaa
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