Mycolicibacter minnesotensis: MMIN_01320
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Entry
MMIN_01320 CDS
T06638
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mmin
Mycolicibacter minnesotensis
Brite
KEGG Orthology (KO) [BR:
mmin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmin03016
]
MMIN_01320
Enzymes [BR:
mmin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MMIN_01320
Transfer RNA biogenesis [BR:
mmin03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MMIN_01320
BRITE hierarchy
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
LPG_synthase_C
Motif
Other DBs
NCBI-ProteinID:
BBY32071
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All DBs
Position
129052..130302
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AA seq
416 aa
AA seq
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MSEQNTEPATEEPAPTPLSHPADGVPEVSVTRSQIGAAADLLAGGHGPFAVDAERASGFR
YSNRAYLIQIRRTGAGTVLIDPVGAGEDPAALLRPVAEVLDDDEWILHAADQDLACLAEV
GMWPKALYDTELAGRLAGYERVNLAAMVQRLLGLGLDKGHGAADWSKRPLPADWLNYAAL
DVEVLIELRHAIADVLAGQGKTDWAAQEFNHLRVTDYATTTRRDRWRRTSGIHKVRDQRG
LAAVRELWTVRDQIAARRDIAPGRILPDSAIIAAAVANPTTAEELLALPVFGGPRQRRSA
ATWLAALAAARDNPEPPEAAESSSGPPPPSRWARRKPEAAARLEAARAALGVVSERVQVP
TENLIIPDLVRRLCWDWKPPKSDTTVVIEEFLAAGGARPWQRELTVPVLAQALGSA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcagaacaccgaaccggccaccgaagagcccgcgccgacaccgctgtcgcat
cccgccgacggagtgccggaggtgtcggtcacccgctcgcagatcggcgccgccgcagac
ctactggccgggggccacggcccgttcgcggtagacgccgagcgggcttcgggcttccgc
tactccaatcgggcttacctgatccagatccggcgcacgggcgccgggaccgtgctgatc
gatccggtgggcgcgggcgaggacccggcggctctgctacgcccggtggccgaggtcctc
gacgacgacgagtggatcctgcacgctgccgaccaagacctggcctgcctggccgaggtc
ggtatgtggcccaaggcgctctatgacaccgaacttgccgggcgactggccggctacgag
cgggtcaacctggccgcgatggtgcaacgactgttggggctgggtctggacaaaggccac
ggggccgccgactggtcgaagcggccgctgcccgccgactggctgaactatgcggcactg
gacgtcgaagtgctcatcgaactccgtcacgcgatcgccgatgttctggctgggcagggc
aaaactgattgggcagcacaggaattcaaccaccttcgggtcaccgactacgccacgacc
acgcgccgggaccgctggcgacgcacatcgggcatccacaaggtgcgtgatcagcgtggc
ctggcagcagttcgagagctgtggacggttcgtgaccagatcgcggcgcgacgtgacatc
gcgcccggacgcatcctgcccgactcggcgatcatcgccgcggccgtggccaaccccacc
accgcagaagagttgctcgcactgccggtcttcggcggacccagacaacgtcgcagcgcg
gccacctggctggcggcactggccgcggcccgcgataaccccgagccgcccgaagcagca
gaatcgagcagcggccccccgcccccgtcgcgatgggcacggcgcaaacccgaggcggcg
gcccggttggaggcggctcgcgccgcactgggtgtggtgtctgagcgggtgcaggtaccg
acggagaatctgatcatccccgacctggtgcgcaggttgtgctgggactggaaaccgccg
aagtcggacaccacggtggtgatcgaggagttcttggccgccggcggagcgcggccatgg
caacgcgagctgaccgtgccggtgctggcacaggccctcggcagcgcctag
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