Mycolicibacter minnesotensis: MMIN_03580
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Entry
MMIN_03580 CDS
T06638
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mmin
Mycolicibacter minnesotensis
Pathway
mmin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MMIN_03580 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmin03400
]
MMIN_03580 (fpg)
Enzymes [BR:
mmin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MMIN_03580 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MMIN_03580 (fpg)
DNA repair and recombination proteins [BR:
mmin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MMIN_03580 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
DZR
DUF2688
Motif
Other DBs
NCBI-ProteinID:
BBY32297
LinkDB
All DBs
Position
complement(345135..345980)
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AA seq
281 aa
AA seq
DB search
MPELPEVEVVRRGLDRHLVGRTITAVRVHHLRAVRRHEAGPADLTGRLLGATIAGTDRRG
KYLWLLLHGAAADEALVVHLGMSGQMLLGELADTRHLRIAALLDDGTKVSFVDQRTFGGW
QLTDLIEVDGAVVPLPVAHLARDPLDPHFDAESVVEVLRRKHSEIKRQLLDQTVVSGIGN
IYADEALWRAGIRGTRTADKLSRPRLRALLGAAADVMNDALAAGGTSFDSLYVNVNGESG
YFSRSLDAYGREDQPCRRCGTPIRRAKFMNRSSYYCPNCQR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcccgaggtcgaggtggttcggcgcggtctggacaggcacctggtcggt
cgcacgatcaccgcggtgcgtgtgcatcacctgcgggccgttcgccggcatgaggccggc
cccgccgatctgaccggccggctgctgggcgcgacaatcgcaggtacggaccggcgcggc
aaatacctgtggctgttgctgcacggtgccgctgccgacgaggcgctggtggtgcacctc
gggatgagtggtcagatgctgttgggggagctcgccgacacccggcatctgcgcatcgct
gcgctgctcgatgacggtacgaaagtcagcttcgtcgaccagcggaccttcggcgggtgg
cagctcaccgatctgatcgaggtggacggtgccgtggtgccgctgccggtcgcgcacctg
gctcgcgatccgctggacccgcacttcgacgccgaatcggtggtcgaggtcctgcgccgc
aagcactccgagatcaaacgccagcttctcgaccagaccgtggtgtcgggaatcggcaat
atctacgccgacgaggcattgtggcgggccggtattcggggcacgcgcacggccgacaaa
ctgtcccggccgcggttgcgggcgctactgggagctgccgcggacgtgatgaacgacgcg
ctggccgcgggaggtacctcgttcgactcgctctacgtcaacgtcaacggtgagtccggc
tacttcagccggtcgctggacgcctatggccgcgaagaccagccgtgtcggcgttgtggg
acgccgatccgccgggcgaaattcatgaatcgctcgtcgtattactgcccgaattgccaa
cgttga
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