KEGG   Mycolicibacter minnesotensis: MMIN_08030
Entry
MMIN_08030        CDS       T06638                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mmin  Mycolicibacter minnesotensis
Brite
KEGG Orthology (KO) [BR:mmin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmin03400]
    MMIN_08030
Enzymes [BR:mmin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MMIN_08030
    5.6.2.6  RNA 3'-5' helicase
     MMIN_08030
DNA repair and recombination proteins [BR:mmin03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MMIN_08030
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH3_Lhr WH4_Lhr WH2_Lhr Helicase_C ResIII AAA_25 PhoH DUF6406
Other DBs
NCBI-ProteinID: BBY32742
LinkDB
Position
797521..801981
AA seq 1486 aa
MSSEHADPMARFSALTRDWFTGTFSAPTPAQEQAWSAIADGHNTLVIAPTGSGKTLAAFL
WALDQLSSQPRKARGNGTRVLYVSPLKALAVDVERNLSTPLTGIARMAAQRDLPAPDITV
GVRSGDTSPARRRELVAKPPDILITTPESLFLMLTSAARETLTGVGTVIVDEVHAVAGTK
RGTHLALSLERLDAILPHPAQRIGLSATVHPAEEVARYLSGQSPTTIVAPPTAKTFELTV
QVPVPDMANPAEGSVWPEVEERVVDLIEAHRSSIVFANSRRLAERLTGRLNEIHAERCAD
IEGAAVPLARAHHGSVSLQTRADVEEDLKSGRLRAVVATSSLELGIDMGAVDLVIQIEAP
PSVASGLQRVGRAGHQVGEISSGVLIPKHRTDLIGCGVTVQRMLAGAIETLAVPANPLDI
LAQHTVAAAALEPLNAEAWFDTVRRSAPFATLTRGVFEATLDLLSGKYPSTEFAELRPRL
VYDRDNGILTARPGAQRLAVTSGGAIPDRGLFAVYLAGADKPSRVGELDEEMVYESRPGD
VISLGASSWRITEITHDRVLVAPAPGQPGRLPFWHGDGVGRPAELGAALGAFTGELAGLA
PEAFDRRCASLGFDDFAIDNLRRLLDDQRAATTTVPTDTTLMVERFRDELGDWRVVLHSP
YGLRVHGPLALAVGRRLRDRYGIDEKPTASDDGIVVRLPDMIPDGDAGPPGADLFVFDAD
EIEPLVTAEVGGSALFASRFRECAARALLLPRRHPGRRTPLWQQRQRAAQLLDVARKYPA
FPIVLETVRECLQDVYDVPALTRLMAQIAQRRVRVTQVETVTPSPFAASLLFGYVGAFMY
EGDSPLAERRAAALSLDPSLLAQLLGRVELRELLDPEVISGLTSQLQHLTPEKAARDAEA
IADLLRLLGPLTTEEISARAAGADVGGWLEHLLSARRVLVVAFGGQRWWVAVEDIGRLRD
GLGVAVPPGVPTGFTEPVADPLGDLLGRFARTRGPFTTGQTAQRFGLGVRVAADALGRLA
ADRRVMRGEFADFPDSPGEQWCDTEVLRILRRRSLAALRAAIEPVSPAAYGRFLPAWQQI
GTSGAATGGIDGLAGVIEQLAGVALPASAVEPLIFGPRVRDYSPAMLDELLASGEVLWSG
AGAPAGSAPASDGWIRFHTADSAALTLAPVSPIELGETHRAILDALGGGGAFFFRQLCGN
ANEVEFKTALWELIWAGWVTGDTFAPMRAVLAGTRRAAPAHRARRPPRLSRYSVAHAATR
AADPAVAGRWSVLPAPEAESTLRAHHTAELLLHRYGVLTRGAVAAEAPPGGFATAYKVLT
AFEEAGRCQRGYFIESLGAAQFAQASTVDRLRGYLDGIDPARPEYHAVALAAADPANPYG
AALSWPAHPGTARPGRKAGALVVLVDGELTWFVERGGRSLLNFAAATEAQAAAAAALAQL
ISDRRVDGILIERVDGTTVLEVRDSPTLDALMQAGFSRTPRGLRMR
NT seq 4461 nt   +upstreamnt  +downstreamnt
atgagctcggagcacgccgacccgatggcccgtttctcggcgttgacccgggactggttc
accggcactttcagcgcgccgacaccggcacaggaacaggcctggtcggcgatcgccgac
ggccacaacaccctcgtcatcgcaccgaccggctcgggaaagacgctggccgcattcctg
tgggctttggaccagctcagctcccagccccgtaaagcacggggcaacggaacccgggtc
ctgtacgtctcaccgctgaaagcactggccgtcgacgtcgagcgcaacctgagcaccccg
ttgaccggcatcgcccgcatggccgcacagcgcgacctgcccgcccccgacatcaccgtc
ggggtgcgttcgggtgacacatcaccggcgcgccgccgcgagctggtcgccaaaccgccc
gacatcctgatcaccactcccgagtcgctgtttctgatgctcacttcggcagcccgggag
accctgaccggggtgggaaccgtgatcgtcgacgaggtgcacgccgtggccggaaccaaa
cgcggaacccacctggccctgtcgttggaacgcctcgacgccatcctgccccaccccgcc
cagcggatcggcctcagcgccaccgtgcatcccgccgaggaggtcgcccgatacctgtcc
gggcagtcccccaccacgatcgtggctcccccgacagccaagacattcgagctgacggtc
caggtccccgtccccgacatggccaatccggctgaagggtcggtctggccggaggtggaa
gaacgcgtggtcgacctgatcgaagcccatcgatcgtcgattgtgttcgccaattcccgg
cggctcgccgagcgcctgaccgggcggctcaacgagattcatgcggaacgctgcgccgac
atcgagggcgccgcggtaccgctggcccgggcgcaccacggctcggtgtcactgcagacc
cgagccgacgtcgaggaggacctcaaaagcgggcggttgcgggcggtagtggccacgtcg
agcctggaactgggcatcgacatgggcgcggtcgatctggtcatccagatcgaagcaccc
ccctcggtggccagcggcctgcagcgcgtcggccgcgccggccaccaggtcggcgagatc
tcctcgggcgtgctgattcccaagcaccgtaccgatctgatcggatgtggcgtcaccgtg
cagcggatgctggccggtgcgatcgagaccctggccgtaccggccaaccccctcgacatc
ttggcccagcacacggtggccgccgccgccctggagccgctgaacgccgaggcctggttt
gacacggtgcgtcgcagcgccccgttcgcgaccctgacccgcggcgtcttcgaggcgacg
ctcgatctgctctccgggaaatacccctcgacagaattcgcggagctgcggccacggctg
gtctacgaccgcgacaacgggattctgaccgctcggccgggtgcgcaacggctggctgtc
acctccggtggagcgatccccgaccggggcctattcgcggtctatctggcgggcgcggac
aaaccctctcgggtaggcgaactcgatgaggaaatggtctacgagtcacgtcccggcgac
gtgatctccctgggagccagcagctggcgaatcaccgagatcacccacgaccgggtgctg
gtcgccccggcaccaggccagccgggccgactgccgttctggcacggcgacggggtgggg
cgaccagccgagctgggtgcagcgctcggcgcattcaccggagagttagccggtctggcc
cctgaggcgttcgacagacgttgcgcaagtctgggtttcgatgattttgccatcgacaac
ctgcggcgactgctcgacgaccagcgtgccgccaccaccacggtgcccaccgacaccacc
ctgatggtggaacggttccgcgacgagctcggggattggcgggtggtgctgcactccccc
tacggcctgcgggtgcatgggccactggccctggccgtggggcgccggctgcgtgaccgc
tacggcatcgacgagaagccgacggcctccgacgacggcatcgtggtgcggttgcccgac
atgatccccgacggcgatgccggtccgcctggcgcggacctgttcgtgttcgacgccgac
gaaatcgagccgctcgtcaccgcagaggtcggtggctcggcactgttcgccagccgattc
cgcgagtgcgcggcccgggcgctgctgctgccgcgtcgacaccccggccgccggacaccg
ttgtggcagcaacgccagcgcgccgcccagttacttgatgtcgcacgcaaatatccggcc
ttcccgatcgtgctggagaccgtgcgggagtgcctacaggacgtctacgacgtccccgcg
ttgaccaggctgatggcacagatcgcccagcgccgggtgcgcgtgacccaagtcgagaca
gtcaccccgtcgccgttcgcggcgtcactgttgttcggctacgtcggggcattcatgtac
gagggcgacagcccgctggccgagcggcgcgccgcggcactgtcactggatcccagcctg
ttggcccagttgctgggccgggtcgagctgcgcgagctgctcgaccccgaggtgatctcc
ggcctgacctcgcaactgcagcacctcacccccgagaaggccgcccgcgacgccgaggcg
atcgccgacctgctgcggctgctgggcccgctgaccaccgaggagatcagcgcgcgggcc
gcgggagcggacgtgggcggctggttggagcacctgttgtccgccaggcgggtgttggtg
gtggcgttcggcgggcaacgctggtgggtcgccgtcgaggacatcggtcggctgcgcgac
gggctcggggtggcggtaccgcccggagttcccacgggtttcaccgagccggtggccgac
ccgttgggtgacctgctgggccgcttcgcccgtacccgggggccgttcaccaccggacag
acggcgcagagattcgggctgggtgtgcgggtggcggccgatgcgctgggccggctggcc
gccgacaggcgggtgatgcgcggtgagttcgccgactttccggactctcccggcgaacag
tggtgcgacaccgaggtgttgcggatcctgcggcgccgttccctggccgcactgcgcgcg
gctatcgagccggtgtcgccggccgcctacgggaggttcctgccggcctggcagcagatc
ggtacctcgggcgccgccaccggtggaatcgacgggttggccggagtgatcgagcagctg
gctggcgtggcactgcccgcatccgcggtcgaaccgttgatcttcggtccgcgggtccgc
gactactcaccggccatgctcgacgaactgctggcctccggggaggtgctctggtcgggc
gccggagctcccgccggaagtgcgccggcaagcgacggctggatcagatttcataccgct
gattcggcggcactgacgctggcccccgtctcccccatcgaattgggcgagacccaccgg
gccatcctggacgcgctcggcggcggcggagccttcttcttccgtcagctgtgcggcaac
gcgaacgaggtggagttcaaaaccgcactgtgggagctgatctgggcgggctgggttacc
ggtgacacgttcgccccgatgcgggcggtcctggccggaacccggcgcgccgccccggca
caccgtgcccgacgcccgccccggctcagtcgctacagcgtcgcccacgccgcgacccgc
gccgcggacccggccgtggccggtcgctggtcagtcctaccggcgccagaagccgaatcc
acgttgcgggcgcaccacaccgccgaactactcctgcaccgttacggggtgctcacccga
ggcgcggtcgccgccgaagcgccgccgggcggtttcgcgaccgcctacaaagtgctgacg
gctttcgaggaggccgggcgctgccagcgcggctacttcatcgaatcgctgggggccgcg
cagttcgcacaggcctccaccgtggaccggttgcggggatacctcgacggcatcgacccg
gcccggcccgaataccacgccgtggccttggcagcggccgacccggccaacccgtacggg
gcggcattgagttggccggcacaccccgggacggcgcggccgggacgcaaggcgggcgcg
ctggtggtcctggtcgatggcgagctgacatggttcgtcgagcgcggtggacggtcgctg
ctgaacttcgccgccgccactgaagcacaggccgccgccgcagcagcactggcacagctg
atcagcgaccgaagggtcgacggaattctcatcgaacgggtcgacggtacaacggttttg
gaggttcgcgattcgcctaccctcgacgcgctgatgcaggctgggttctcccgtacgcca
cgcggattgcggatgcgctga

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