Mycolicibacter minnesotensis: MMIN_10620
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Entry
MMIN_10620 CDS
T06638
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mmin
Mycolicibacter minnesotensis
Brite
KEGG Orthology (KO) [BR:
mmin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmin03019
]
MMIN_10620
Enzymes [BR:
mmin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MMIN_10620
Messenger RNA biogenesis [BR:
mmin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MMIN_10620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND_NTPase5
NACHT
Toxin_SdpC
T2SSE
nSTAND3
ABC_tran
PhoH
Motif
Other DBs
NCBI-ProteinID:
BBY33001
LinkDB
All DBs
Position
complement(1085107..1089054)
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AA seq
1315 aa
AA seq
DB search
MLCEVVEPSVAQLRTLLDELTARDAAYFGRLLKDLRGGKPEQVRKLAERMAQAQALVAAR
RAAVPTISYPDLPVSARRDEIAAAIRDHQVVVVAGETGSGKTTQLPKICLELGRGIRGTI
GHTQPRRLAARTVAARIADELASPLGDVVGYAVRFTDRVSDRTLVKLMTDGILLAELERD
RRLLRYDTLIIDEAHERSLNIDFLLGYLRELLPRRPDLKVIITSATIEPQRFAAHFGSRT
ENGSHGGAPIVEVSGRSYPVEIRYRPLELPANSDAGDDPDDPDHEIIRTETRDEIEAIVD
AVQELASEPPGDILVFLSGEREIRDTAEALGGLTNTEILPLYARLSTAEQQKVFSPARAG
RRVVLATNVAETSLTVPGIRYVIDPGNARISRYSRRLKVQRLPIEPISQASAAQRSGRCG
RTAPGICIRLYSEADFGARPRYTDPEVLRTNLAAVLLRMASLRLGAVEDFGFLDPPDSRS
IRDGVQLLVELGAFTPQGVITDVGRRLARLPVDPRVGRMILAAEAEGCVREVLVLAAALT
IPDPRERPAEREEAARAKHARFADEASDFIGYLNLWTYLSDQRKALTGSAFRRMCREDFL
HYLRIREWQDLAGQLRSIAGDIGIRDSRGPDEQRADPSSIHAALLAGLLSHVGMRRDDGR
EFAGARNSKFVLAPGSVLARRPPRWTMVAELVETSRLFGRTAARIEPEVIERVAVDLVQR
TYSEPHWDAKRGEVMAFEKVTLYGLPLVARRRVGYARVEPAVARELFIRHALVENDWGSG
HRFLADNAALRSQLQELEDRVRRRDLIVDDDTVHDLYDARIPAEVVSARHFDGWWKKQRQ
VTPALLTFTRDELLRTEETPGADRPDNWATADLALPLTYRFEPGAADDGVTVHVPIDVLA
RLGGDEFAWQVPALREELITALIRSLPKELRRNFVPAPDTARAVLSAIGPSEEPLLEVLV
HELRRRTGVLVPVEAFDLTKLPAHLRVTFAVEAADGSEVARGKDLAALQDRLAGSARAAV
ADAVGTELERTGLRSWPDDLDSLPAVVQRMVAGRTVRGFPAFDDAGATAQLRVFATEAQQ
RSALGRGIRRLLRCDIASPVKAVERQLDSKTRLMLKANPDGSLTALIDDCADAAIDALTP
APVWSRADYVALRTRVAATLVPTTADVVARVARVLAAARDTQVALPTQSTPAQAEAIADI
TDQLDGLLAPGFVAATGRAHLVDLTRYLVAVQRRLEQLPRAPQADRERMGRVRAVQDAYR
DLLAALPSARHSDEAVRDIARQIQELRVSLWAQQLGTPRPVSEQRIYRAIDALLA
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgctttgcgaagtggtcgaaccgtccgtcgcgcagttgcgtacgctcctcgacgagctg
accgcccgcgatgcggcctacttcggacggctgctcaaggatctgcgcggcggaaagccg
gaacaagtacgtaagttggccgagcggatggcccaggcgcaggcgctggtggcagcccgg
cgcgcagcggtaccgaccatcagctatcccgacctgccggtcagtgcgcgccgcgacgag
atcgctgcggcaatcagggaccaccaggttgtggtggtcgccggcgagaccggctccggc
aagaccacccagttgcccaagatctgcttggaactcggccgcggaatccgcggcaccatc
ggtcatacccagccgcggcgactagccgcccgcacggttgcggcacgtatcgccgatgaa
ctggccagcccgctcggcgatgtcgtcggctacgcggtcagattcaccgaccgggtgtcc
gaccgcaccctggtcaaactgatgaccgacggcatcctgctcgccgagttggaacgagat
cgccggctgctgcgctatgacaccctgatcatcgacgaggcgcatgagcgcagtctcaac
atcgacttcctgctgggttacctgcgtgagctgttgccgcgccgaccggatctgaaggtg
atcatcacctcggccaccatcgaacctcagcgattcgcagcgcacttcggtagtcgcacc
gaaaacgggagtcacggcggcgcgccgatcgttgaggtgtccggtcgcagctacccagtc
gagatccgttatcgcccactggagctgccggccaactccgacgccggtgatgaccccgat
gaccctgatcacgaaatcatccgcactgagacgcgcgacgagatcgaagcgatcgttgac
gcggtccaggagctggcttccgagccgcccggcgacatcctggtgttcctgtctggtgag
cgtgagatccgcgacaccgcagaggctttgggcgggctgaccaataccgagattcttccg
ctgtacgcccggctgtcgaccgccgagcagcagaaggtcttcagcccagcgcgcgcggga
cggcgcgttgtgctggccaccaacgtcgccgagacgtcgctgacggttccgggcattcgc
tatgtcatcgacccgggcaatgcccgcatctcgcgctacagtcgccggctgaaggtgcaa
cggctgccgatcgaaccgatttcgcaggcctccgcagcccagcgcagcggccgttgcggc
cgcaccgcgccagggatctgtatccggctctacagcgaggccgacttcggtgcccgcccg
cgctacaccgacccggaggtgttgcgcaccaacctggctgcagtgctgctgcggatggcc
tcgctgcggctgggtgcggtggaggatttcggtttcctggacccgccggattcacgcagc
attcgcgacggagtgcagttgctggtcgaactcggtgcgttcaccccacagggggtgatc
accgatgtggggcgccggctggcccggttgccggtggatccgcgcgtgggccggatgatc
ctggccgccgaggcggaaggctgtgtgcgtgaggtgctggtgctcgcggccgccctaacc
atccccgaccccagggagcggccggctgagagggaagaagcggcgcgggccaagcatgcc
cggttcgccgacgaggcgtcggacttcatcggttacctcaatctttggacgtacttatcc
gatcaacgtaaggctttgaccggcagcgcattccggcggatgtgtcgggaggattttctg
cactacctgcgtatcagggaatggcaggacttggcggggcagctgcgcagcatcgccggt
gatatcggcatccgtgattcgagggggccggacgaacagcgggctgacccgtcgtcgatc
catgccgcgttgctggccgggctgttgtcgcatgtggggatgcggcgcgacgacggccgc
gaattcgccggtgcccgcaactcgaagttcgtcctggcccctggctctgtgctggccaga
cggccaccgcgctggacgatggtggccgaattggtagagacgagccggttgttcgggcgt
accgccgcgcgtatcgaaccggaggtcatcgagcgggtcgccgtcgacttggtgcaacgc
acctacagcgaaccgcactgggacgccaagcgtggcgaggtgatggccttcgaaaaggtg
acgctctacgggctgccgctggtggcgcgccgacgggtcggctacgcccgggtagaaccg
gcggtggcccgtgagctgttcatccggcacgccctcgtggagaacgactggggatcgggg
caccgattcctggccgacaatgcggcgttgcgcagccaacttcaggagctcgaggaccgg
gtccggcgccgcgatctgatcgtggacgacgacaccgtccacgacctctatgacgctcgc
attcccgccgaggtggtctcggcacgtcacttcgacggctggtggaagaaacagcggcag
gtcacgcccgcgctgctgaccttcacccgcgacgagctgttgcggaccgaggagacgccc
ggcgccgaccgcccggacaattgggccaccgccgacctcgcgttgccactgacctaccgt
ttcgagccgggtgctgccgacgacggggtcaccgtccacgtgccgatcgacgtgctggcg
cgcctcgggggcgacgaattcgcctggcaggtgccggccctgcgcgaggaactgatcacg
gcgctgatcaggtcactgcccaaagagctgcggcgcaatttcgtgcccgcgcccgacacc
gcccgcgcggtgctctccgccatcggcccatcggaggaaccgctgctggaggtgctggtg
catgaactgcggcggcgcaccggggtgctggtgccggtagaggcctttgatctgaccaag
ctgccggcgcacctgcgggtcaccttcgcggtggaggccgccgacggcagcgaggtggcc
cgtggcaaggatctcgccgctttgcaggatcgactggcagggtcggcgcgcgctgcggtc
gccgatgcggtcggtacagagctggaacgcaccggactgcgcagctggccagatgacctc
gactctttgccggccgttgtgcaacggatggtggccgggcgcaccgttcgtggcttcccc
gcattcgacgatgccggcgccaccgcgcagttgcgggtgttcgctacggaggctcagcag
cgatccgcgctggggcgcggtatccgccgtctgttgcggtgcgatattgcttcgcccgtc
aaagcggttgaacgtcagcttgattcgaagactcgactcatgctcaaggcgaacccggac
ggttcgctgacggcgttgatcgacgactgcgccgacgccgcgatcgacgcgctgaccccg
gcgccggtgtggagccgcgccgactacgtcgcgctccggacccgggtggccgccaccctg
gtccccacaacggccgatgtggtggcccgggtcgcccgggtgctggcggcagcccgcgac
actcaggtggccttgccgacgcagtcgacgcccgcccaggctgaggcgatcgccgatatc
accgaccagctcgacggcctactggcacccggattcgtcgccgccaccggacgtgcccac
ttggtcgacctgacccgctacctcgtcgccgtccaacgccggttggagcagttacccagg
gcgccgcaggccgaccgggaacggatgggccgggtgcgggcggtccaagacgcctaccgg
gaccttctggcggcactgccgtcggcgcgccacagcgacgaggcagtgcgcgacatcgcc
cgtcagatccaagagttgcgggtgagcctatgggcccagcagctcggcacgccgcgtccg
gtcagcgaacagcggatctaccgggccatagacgcgctactcgcttga
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