Mycolicibacter minnesotensis: MMIN_13480
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Entry
MMIN_13480 CDS
T06638
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmin
Mycolicibacter minnesotensis
Brite
KEGG Orthology (KO) [BR:
mmin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmin03032
]
MMIN_13480 (topA)
03400 DNA repair and recombination proteins [BR:
mmin03400
]
MMIN_13480 (topA)
Enzymes [BR:
mmin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MMIN_13480 (topA)
DNA replication proteins [BR:
mmin03032
]
Prokaryotic type
DNA Topoisomerases
MMIN_13480 (topA)
DNA repair and recombination proteins [BR:
mmin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MMIN_13480 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BBY33287
LinkDB
All DBs
Position
complement(1403159..1405960)
Genome browser
AA seq
933 aa
AA seq
DB search
MADSKTVSARNGDKTPVRRLVIVESPTKARKIAGYLGSNYVVESSRGHIRDLPRNAADVP
AKYKTEAWARLGVNVDADFEPLYIVSPDKKSTVTELKGLLKDVDELYLATDGDREGEAIA
WHLLETLKPRIPVKRMVFHEITEPAIRNAAENPRDLDIDLVDAQETRRVLDRLYGYEVSP
VLWKKVAPKLSAGRVQSVATRIIVQRERERMAFRSAAYWDVVAQLDASVSDPTASPATFT
ARLVAVDELRVASGRDFDSLGALKKPDEVRVLDEAAATSLAAGLQGASLAVTSVEEKPYT
RRPYAPFMTSTLQQEAGRKLRYSAERTMSIAQRLYENGYITYMRTDSTTLSQSAIDAART
QARQLYGEEYVSPSPRQYTRKVKNAQEAHEAIRPAGETFATPDAVRNELGSDEFRLYELI
WQRTVASQMADARGTTLSLRIGGNSGAQQVTFAASGRTITFAGFLKAYVETVDELAGGEA
DDAERRLPQLTQGQRVDAAEANPDGHATNPPARYTEASLVKSLEELGIGRPSTYSSIIKT
IQDRGYVYKKGSALVPTWVAFAVIGLLERHFGRLVDYDFTAAMEDELDGIAAGRQRRTDW
LHNFYFGGDYGVEGSISRAGGLKKLVGVNLEGIDAREINSIKLFDDAEGRPVYVRVGKNG
PYLERMVTGDDGEPTPQRANLDDSLPPDELTLALAEERFATPQEGRSLGVDPATGHEIVA
KDGRYGPYVTEVLPPPPDDESGATAKKGKKPVDPKPRTGSLLRSMSLETVTLDDALKLLS
LPRVVGADPESGEEITAQNGRYGPYLKRGTDSRSLATEEQIFEISLEDALKIYAEPKRRG
RQSAAAPPLRELGADPASGKPMVIKDGRFGPYVTDGETNASLRKGDEVASITDERAAELL
ADRRARGPVKKAAKKTVRKAPAKKAPAKKAAKR
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
gtggctgactctaagacggtgagcgcccgcaatggcgataagacacccgtgcggcggctc
gtcatagtcgagtcgcctaccaaggcacggaaaattgcgggctacctgggcagcaactac
gtcgtcgagtcctcccgagggcatatccgcgacctgccgcgcaacgctgccgatgtcccg
gccaagtacaagacggaagcgtgggcacgcctcggcgtcaacgtcgacgccgacttcgaa
ccgctttacatcgtcagccccgacaagaagagcacggtcaccgagctcaaaggcctgctc
aaagacgtcgacgagctctatctggctaccgatggtgaccgcgagggcgaggcgatcgcc
tggcacctgctggagaccctgaagccgcgtataccggtcaaacggatggtgttccacgag
atcaccgagccggccatccgcaacgccgccgaaaacccccgtgacctggacatcgatctg
gtggacgcgcaggagacccggcgtgtgctggaccggctgtacggctacgaagtcagcccg
gtgctgtggaagaaggtcgcgccgaagctgtcggccggtcgggtccaatcggtggccacg
cgcatcattgtgcagcgcgaacgcgagcggatggcgtttcgcagcgcggcctactgggac
gtggtcgcccaactggacgccagtgtctccgatccgaccgcctctcctgccaccttcacc
gcccgattggtcgcggtcgacgaactacgtgtggccagcggccgcgacttcgactcgctg
ggggctttgaagaagccggatgaggtgcgggtgctcgacgaggccgcggccacctcgctg
gcggccgggctgcagggcgcgtcgctggccgtgacgtcggtggaggagaagccctacact
cggcggccctacgcgccgttcatgacctcgacgttgcagcaggaggcgggccgcaagctg
cggtactccgccgagcggacgatgagcatcgcccagcggctctacgaaaacggctacatc
acttacatgcgtaccgactccacgacgctgtcgcagtcggccatcgatgcagcccgcacc
caggctcgccagctctatggcgaggagtacgtgtcgccgtcgccacgccagtacacccgc
aaggtcaagaacgcccaggaagctcacgaggccatccggccggccggcgagaccttcgcc
acccccgacgcggtccgcaacgagctgggcagcgacgagttccggctctacgagctgatc
tggcagcgcaccgtcgcctcgcagatggccgacgcccgcggcaccacgttgagcctgcga
atcggcgggaactccggggctcagcaggtgacgtttgccgccagcggtcgcaccatcacc
ttcgcgggcttcctcaaggcctatgtggagaccgtcgacgagttggccggcggtgaagcc
gacgacgccgagcggcggttgccgcagctgacccagggccagcgggtggatgccgccgag
gcgaacccggacggtcacgccaccaacccgccagcgcggtataccgaagcgtcgctggtg
aagtcgctcgaagagttgggcatcggacggccgtcgacgtactcctcgatcatcaagacc
atccaggaccgcggctacgtctacaaaaagggcagcgcactggtcccgacgtgggtggcg
ttcgctgtgatcggcctacttgagcggcacttcggccggctggtcgactacgacttcacc
gcggccatggaggacgagctcgacgggatcgccgccgggcgtcagcgccgcaccgactgg
ctgcacaacttctacttcggcggcgactacggggtggaaggctcgatttcccgggccggc
ggcctgaagaagctggtcggggtcaacctggagggcatcgacgcccgcgagatcaactcg
atcaagctcttcgacgacgccgaaggcaggcccgtctatgttcgggtgggcaagaacggg
ccctacctggaacggatggtcaccggtgacgacggcgagccgactccgcagcgggccaac
ctggatgactcactcccgccggacgagttgaccctggcgctggccgaggaacgcttcgcc
accccgcaggagggcaggtcgctcggggttgacccggctaccggccacgagatcgtcgcc
aaggacggccgctacggcccgtacgtcaccgaagtcctgccgccgccgccggacgacgag
tccggagcgacggccaagaagggcaagaagccggtcgaccctaagccccgcaccggctcg
ttgctgcggagcatgagcctggaaaccgtcactctcgacgacgcactgaagctgctgtca
ttgccacgggtggtgggtgccgacccggaatcgggcgaggagatcaccgcacagaacggt
cgctacgggccgtatctgaagcgcggcactgactctcggtcgctggccactgaggagcag
atcttcgagatctctcttgaggacgcgctgaagatctacgccgagcccaagcgtcgtggc
cggcagtcggctgcggctccgcccctgcgtgaactgggcgccgatccggcgagcggcaag
ccgatggtgatcaaagatggccggttcggtccgtacgtcaccgacggcgagaccaatgcc
agcttgcgcaagggcgacgaggtggcctcgatcaccgacgagcgtgccgcggaactgctg
gccgaccggcgagctcgcggaccggtcaagaaggctgccaagaagacggtccgcaaggcc
ccggcgaaaaaggcgcccgccaaaaaagctgcgaagcgctga
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