Mycolicibacter minnesotensis: MMIN_23450
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Entry
MMIN_23450 CDS
T06638
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mmin
Mycolicibacter minnesotensis
Pathway
mmin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MMIN_23450 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmin03021
]
MMIN_23450 (rpoB)
03400 DNA repair and recombination proteins [BR:
mmin03400
]
MMIN_23450 (rpoB)
Enzymes [BR:
mmin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MMIN_23450 (rpoB)
Transcription machinery [BR:
mmin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MMIN_23450 (rpoB)
DNA repair and recombination proteins [BR:
mmin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MMIN_23450 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
BBY34284
UniProt:
A0A7I7R6J2
LinkDB
All DBs
Position
2505325..2508861
Genome browser
AA seq
1178 aa
AA seq
DB search
MAVSRQSKKNTSGTTTQNSPNSSVPGAPNRVSFAKLREPLEVPGLLDVQTDSFQWLIGAA
QWREKMAEQTGAAPKGGLEEVLEELSPIEDFSGSMSLSFSDPRFDEVKAPVDECRDKDMT
YAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFD
ANIDKSTEKTLHSVKVIPGRGAWLEFDVDKRDLVGVRIDRKRRQPVTVLLKALGWTSDQI
RERFGFSDIMMSTLEKDSAANSDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDL
ARVGRYKINKKLGLTANPGEPQPTTLTEEDIVATIEYLVRLHQAAQDGDGVSATMTVPGG
VEVPVEVDDIDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINI
RPVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHY
GRMCPIETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVVEGVVTDEIHYLTADEEDRHV
VAQANSPLEEDGHFTEDRVLVRRKGGEVEYVSSAEVDYMDVSPRQMVSVATAMIPFLEHD
DANRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVIVADKTGVIEEVSADYVTV
MADDGTRQTYRMRKFNRSNHGTCANQRPIVDAGQRVETGQVIADGPCTDNGEMALGKNLL
VAIMPWEGHNYEDAIILSNRLVEEDTLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEV
LADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVP
HGESGKVIGIRVFSREDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILP
AEDMPFLPDGTPVDIILNTHGVPRRMNIGQILETHLGWIAKTGWNIDVATGVPDWADKLP
EELYSAGPDTRTATPVFDGAQEAELQGLLSSTLANRDGEVMVNADGKARLFDGRSGEPFP
YPVTVGYMYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYG
AAYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLAK
DGAAIELREGEDEDLERAAANLGINLSRNESASVEDLA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctcccgccagagcaaaaagaacacctcaggtactaccacccagaattctccc
aacagttctgttcccggagctccgaatcgggtctccttcgccaagctgcgcgaacccctc
gaggttccgggtctgctcgacgtgcagaccgactcgttccagtggctgatcggggctgca
cagtggcgcgagaagatggccgagcagaccggcgctgcgcccaagggtggtcttgaagag
gttctcgaagagctctccccgattgaggacttctccggctcgatgtcgctgtcgttctcc
gacccgcggttcgacgaggtcaaggccccggtcgacgaatgccgcgacaaggacatgacc
tacgccgccccgctgttcgtcaccgcggagttcatcaacaacaacaccggcgagatcaag
agccagacggtgttcatgggtgacttcccgatgatgaccgaaaagggcacgttcatcatc
aacggcaccgagcgggtggtggtttcccagctggtgcgttcccccggtgtgtacttcgac
gccaacatcgacaagtccaccgagaagacgctgcactcggtcaaggtgattccgggccgc
ggtgcctggctggagttcgacgtcgacaagcgtgacctggtcggcgttcgcatcgaccgc
aagcgccgccagccggtcaccgtgctgctcaaggcgctgggctggacttcggatcagatc
cgggagcggttcggcttctccgacatcatgatgtcgacgttggagaaggacagcgcggcc
aactccgacgaggctttgctggacatctaccgcaagctgcgtccgggcgagccccccacc
aaggagtcggcgcagaccctgctggagaacctgttcttcaaggagaagcgctacgacctg
gcccgggtgggtcgctacaagatcaacaagaagctgggcttgaccgccaacccgggcgag
ccgcagccgaccacgctgaccgaagaggacatcgtggccaccatcgagtacctggtgcgt
ctgcatcaggcggctcaggacggcgacggtgtgtccgccaccatgacggtgccgggcggc
gtcgaggttcccgtcgaggtcgacgacatcgaccacttcggcaaccgccgactgcgcacc
gtgggtgagctgatccagaaccagatccgggtcgggctgtcccggatggagcgtgtggtc
cgcgagcggatgaccacccaggacgtcgaggccatcacgccgcagaccctgatcaacatc
cgcccggtggtcgccgcgatcaaggagttcttcggcaccagccagctctcccagttcatg
gaccagaacaacccgttgtcaggtctgacccacaagcgccgcctgtcggcgctgggaccg
ggtggtctgtcgcgtgagcgggccggcctggaagttcgtgacgtgcacccgtcccactac
ggccggatgtgtccgatcgaaaccccggaaggcccgaacatcggtctgatcgggtcgctg
tcggtgtacgcgcgggtcaacccgttcggtttcatcgagacgccgtaccgcaaggtcgtg
gagggtgtcgtcaccgacgagatccactacctgaccgctgacgaggaggaccgccacgtt
gtggcgcaggccaactcgccgctggaggaggacggccacttcaccgaggaccgggttctg
gttcgtcgtaagggtggcgaggtcgagtacgtgtcgtccgccgaggtcgactacatggac
gtctcaccgcgccagatggtgtcggtggccacggccatgattccgttcctcgagcacgac
gacgccaaccgtgccctgatgggcgccaacatgcagcgtcaggcggttccgctggtgcgc
agcgaggcgccgctggtgggtaccggcatggagctgcgggccgcgatcgacgccggcgac
gtgatcgtcgccgacaagaccggtgtcatcgaggaagtgtccgccgactacgtcacggtc
atggccgatgacggaacccggcagacctaccggatgcgcaagttcaaccggtccaaccac
ggcacctgcgccaaccagcgtccgatcgtcgacgccggccagcgcgtggagaccggccag
gtgatcgcggacggcccgtgcaccgacaacggcgagatggccctgggcaagaacctgctc
gtggcgatcatgccgtgggaggggcacaactacgaggacgcgatcatcctgtccaacagg
ctggtcgaagaggacacgctgacctcgatccacatcgaggagcacgagatcgacgcccgc
gacaccaagctgggcgccgaggagatcacccgggacatcccgaacgtctccgacgaggtg
ctggctgacctcgacgagcgcggcatcgtccgcatcggcgccgaggtccgcgacggcgac
atcctggtcggcaaggtcacgcccaagggcgagaccgagctgacgcccgaggagcggttg
ctgcgtgcgatcttcggcgagaaggcccgcgaagtccgcgacacgtcgctgaaggtgccg
cacggtgagtccggcaaggtcatcggaatccgggtgttctcccgcgaggacgacgacgag
ctgcccgccggggtcaacgagctggtgcgcgtctacgtcgcgcagaagcgcaagatctcc
gacggtgacaagctggctggtcgccacggcaacaagggtgttatcggcaagatcctgccg
gccgaggacatgccgttcctgccggacggcaccccggtcgacatcatcttgaacacccac
ggtgtgccgcggcgtatgaacatcggtcagatcctggagacccacctgggctggatcgcc
aagaccggatggaacatcgatgttgcgaccggcgtgccggactgggcggacaagctcccc
gaggagctgtactccgccggcccggacacccgcaccgcgaccccggtgttcgacggcgcg
caggaggccgagctgcagggcctgctgtcctcgacgttggccaaccgcgacggtgaagtc
atggtcaacgcggacggcaaggcgcggctgttcgacggccgctccggtgagccgttcccg
tacccggtgaccgtcggctacatgtacatcatgaagctgcaccacttggtggacgacaag
attcacgctcgttccaccggtccgtactcgatgatcacccagcagccgttgggtggtaag
gcgcagttcggtggccagcggttcggtgagatggagtgctgggccatgcaggcctacggt
gcggcgtacacgctgcaggagttgctgacgatcaagtccgacgacacggtcggccgtgtc
aaggtctacgaggcgatcgtcaagggcgagaacatccctgagcccggtatccccgagtcc
ttcaaggtgctgctcaaagagctgcagtcgctgtgcctcaacgttgaggtgctggcgaag
gacggtgccgcgatcgagttgcgcgaaggcgaggacgaggacctggagcgggcagccgcc
aacctgggaatcaacctgtcccgcaacgaatccgcttctgtggaagacctcgcttaa
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