Mycolicibacter minnesotensis: MMIN_23960
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Entry
MMIN_23960 CDS
T06638
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mmin
Mycolicibacter minnesotensis
Pathway
mmin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MMIN_23960
09124 Replication and repair
03420 Nucleotide excision repair
MMIN_23960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmin03021
]
MMIN_23960
03400 DNA repair and recombination proteins [BR:
mmin03400
]
MMIN_23960
Enzymes [BR:
mmin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMIN_23960
Transcription machinery [BR:
mmin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MMIN_23960
DNA repair and recombination proteins [BR:
mmin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MMIN_23960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
BBY34335
LinkDB
All DBs
Position
complement(2559708..2561360)
Genome browser
AA seq
550 aa
AA seq
DB search
MSTDGPLIVQSDKTVLLEVDHELAGSARAAIAPFAELERAPEHVHTYRITPLALWNARAA
GHDAEQVVDALVSHSRYAVPQPLLVDIVDTMARYGRLQLVKSPVHGLTLVSLDRAVLEEV
LRNKKIAPMLGARIDDDTVVVHPSERGRVKQMLLKVGWPAEDLAGYVDGEAHPIALAQDG
WVLRDYQEMAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAQATTLILVTNTVAGRQWKR
ELIARTSLTEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIIYDE
VHLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIA
PAECIEVRVTMTETERMTYAVAEPEERYKLCATVHSKIAVVRSILKQHPGEQTLVIGAYL
DQLEELGEQLDAPVIQGSTRTAEREKLFDAFRRGEISTLVVSKVANFSIDLPEASVAVQV
SGTFGSRQEEAQRLGRLLRPKADGGGAVFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIR
DADDLLGPAI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgacgggccgctgatcgtccaatccgacaagaccgtgctgctcgaggtcgat
cacgaactggccggttcggcgcgcgccgcgatcgcgccgttcgccgagctggagcgcgcc
ccggagcatgtgcacacctaccgcatcaccccgctggcgctgtggaacgcccgagccgcc
ggccacgacgccgagcaggtggtcgatgcgctggtcagccactcccggtatgcggtgccg
cagccgctgctggtcgacatcgtcgacaccatggcacgctacgggcgcctgcagctggtg
aagagcccggtgcatggtctgactctggtcagcctggatcgcgcggtgctcgaggaagtg
ctgcgcaacaagaagatcgctccgatgctgggcgcccgcatcgacgacgacaccgtcgtg
gtgcatcccagcgaacgcggccgggtcaagcagatgctgctcaaagtcggctggccggcc
gaggatctggccggctacgtcgacggcgaggcccatccgatcgcgctggcccaagacggc
tgggtgctgcgcgactaccaggagatggccgccgactcgttctgggcgggcggctccggg
gtggtggtgttgccctgcggcgccggcaagacattggtgggcgccgccgccatggccaag
gcgcaggccaccacactgatcctggtcaccaacaccgtggccggccggcagtggaaacgc
gagctgatcgcccgcacctcactgaccgaagaggagatcggcgagtactccggtgagcgc
aaggagatccggccggtcaccatcgccacctatcaggtgatcacccggcgcaccaagggc
gaatatcggcacctggagctgttcgacagccgtgactgggggctgatcatctacgacgag
gtgcacctgctgcccgcgccggtgttccggatgaccgccgacctgcagtcgcgccgccgg
ctggggctgaccgcaacattgatccgcgaggacggccgcgaaggtgatgtcttctcgctg
atcggacccaagcgctacgacgcgccgtggaaggacatcgaggcccagggctggatcgcg
ccggccgagtgcatcgaggtgcgggtcaccatgaccgagaccgagcggatgacctacgcg
gtggccgagcccgaggagcgctacaagctctgtgcgacggtgcattccaagatcgcggtg
gtgcgctcgatcctcaaacagcatcccggcgaacagaccctggtgatcggcgcctacctc
gatcaactggaagagctgggcgagcagctcgatgccccggtcatccaaggttcgacccgc
accgccgagcgcgagaagctgttcgacgccttccggcgaggcgagatctccaccctggtg
gtgtccaaggtcgccaacttctcgatcgatctgccggaggcctcggtggcggtgcaggtc
tcgggcaccttcggctcccggcaggaggaggcccagcgtttgggccggctgttgcgcccc
aaggccgacggcggcggcgcggtgttctattcggtggtcgcccgcgacagtctggacgcc
gaatacgccgcacaccggcagcggttcctggccgagcagggctacggctacatcatccgc
gacgccgacgacctgctgggtccggcgatctga
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integrated database retrieval system
