Mycolicibacter minnesotensis: MMIN_30640
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Entry
MMIN_30640 CDS
T06638
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mmin
Mycolicibacter minnesotensis
Pathway
mmin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMIN_30640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmin03019
]
MMIN_30640
03009 Ribosome biogenesis [BR:
mmin03009
]
MMIN_30640
Enzymes [BR:
mmin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MMIN_30640
Messenger RNA biogenesis [BR:
mmin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MMIN_30640
Ribosome biogenesis [BR:
mmin03009
]
Prokaryotic type
rRNA processing factors
MMIN_30640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
IF2_N
Motif
Other DBs
NCBI-ProteinID:
BBY35003
LinkDB
All DBs
Position
3279212..3282310
Genome browser
AA seq
1032 aa
AA seq
DB search
MEDPSLFKGFEGPEFKGPESERAAVAAEPQELPERLRVHSLARVLGTTSRRVLDALTELD
GRTRSAHSSVDRVEAVRVRDLLGATGEPAVGGLFQEAGSAEEADEIPDEPESRLLLETAP
EPVATRADYMPLFVAPQPVALDRAVVRAAEDDVADDDDDDDEPGSAEAEADVDSDADDGD
RPANRRRRRGRRGRGRGRGSEGSASDDVADSEDETEDDDVAAEPEEAGDAEDSGDEDSGS
GEDAGNRRRRRRRRRKAGTGEDDDTAASDDPPNTVVHERAPRAKTNRSAKGDRGTGDDEI
QGITGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLARREAVERRMVVRDRVRTEPPHQG
ARYTQIAVLEDGVMVEHFVTSAASTSLVGNVYLGVVQNVLPSMEAAFVDIGRGRNGVLYA
GEVNWEAAGLGGANRKIEQALKPGDYVVVQVSKDPIGHKGARLTTQVSLAGRYLVYVPGA
SSTGISRKLPDTERQRLKEILREVVPANAGVIIRTASEGVKEEDIRTDVERLQERWSQIE
ATAVETKGKAAGAAVALYEEPDVLVKVIRDLFNEDFSELVVSGDDAWATINEYVGSVAPE
LVSKLTRYQSPTGPDGQAGPDVFAVHRIDEQLAKALDRKVWLPSGGTLVIDRTEAMTVVD
VNTGKFTGSGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVIDFIDMVLESNRDLVLRR
LTEALGRDRTRHQVSEVTSLGLVQLTRKRLGTGLIEAFSTSCQHCAGRGIVLHADPVDSA
GPGRKSEPGGSTTSRRSKRSKKPKVDEPAVVKVPVHTPGDHPMFKAMAAASDRHDEDDEH
ETAPDADEQVVVLTDRSADGTEEAEGADEVGEDDLESDATDEDRADSDGDADDEVVDDDD
TDDDDDDDDDDDVEEVDLDEDDDDDDDDDDVEDVDLDDDDDDDDDDDDDDDDDDDDDDTD
DDDDTDDDDDTDDDDDTDDDDDTDDDDDTDDDDEDLDVIDEADDVEEPEAPVALVERPRR
RRAAARPAGPPI
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
gtggaagacccttctcttttcaaaggcttcgaaggccctgagttcaaaggccctgagtcg
gaacgagcagcagttgccgccgagcctcaggagttgcccgaacgactgcgggtccattcc
ctggcacgggtcctgggcaccacaagccgacgggttctggatgcgctgaccgagctcgat
ggccggactcgcagcgcccattccagtgtggaccgcgtcgaggcggttcgggttcgcgac
cttttgggtgcaaccggggagcccgctgtcggggggctgttccaggaggcgggctcggcc
gaggaagccgacgagattcccgacgagcccgagtcccggctgctgctggagaccgccccg
gaaccggtcgccactcgggccgactacatgccgctgttcgtcgcaccgcagccggtagct
cttgaccgcgcggtggttcgcgccgccgaggacgacgtcgccgatgacgatgacgatgac
gacgagcccggcagtgccgaggctgaggccgacgttgactccgacgccgacgatggtgac
cggcccgccaaccggcgccgccgccgtggtcgccgcggccggggccgcggccgcggctcc
gaagggtcagcatccgacgatgttgcggactccgaggacgagaccgaggacgacgatgtc
gccgcggaaccggaagaagccggggacgccgaggacagcggcgacgaggacagtggctcg
ggtgaagacgcaggcaaccggcgtcgtcggcggcgtcgtcggcgcaaggccgggaccggc
gaggacgatgacaccgccgcgtcggatgacccgcccaacaccgtcgtgcacgagcgggcc
ccgcgggccaagaccaaccgatccgccaagggtgaccgggggaccggtgacgacgagatc
cagggcatcaccggctcgacccggctggaggccaagcggcagcgccgccgcgacggccgc
gacgccggccgccgtcgcccgccgatcctgagcgaagcggagttcctggcccgccgagag
gccgtggaacgccggatggtggtccgtgatcgcgtccggaccgagccgccgcaccagggt
gcccgctatacccagatcgccgtgctcgaagacggcgtgatggtcgagcacttcgtcacg
tccgccgcgtcgacctcgctggtgggcaatgtctacctgggcgtggtgcagaacgtgctg
ccgtccatggaagcggcctttgtcgacatcgggcggggccgcaacggcgtcctctacgcc
ggtgaggtgaactgggaagcggccgggcttggcggcgccaaccgcaagatcgagcaggcc
ctcaagccgggcgactacgtcgtcgtacaggtcagtaaagatccgatcggtcacaagggt
gcccggctcaccacccaggtgtcgctggccggccgctacttggtctacgtgccgggtgcg
tcctccacgggaatcagccgcaagctgccggacaccgagcgtcagcgactcaaggagatc
ctgcgcgaggtggttcccgccaacgccggtgtgatcattcgcaccgcttcggagggcgtc
aaagaagaagacatccggaccgacgtggagcgactccaggaacgctggagccagatcgag
gccaccgcggtcgagaccaagggcaaagcggccggtgccgcggtagcgctctacgaagag
cccgatgtgttggtgaaggtgattcgggacctcttcaacgaggacttctccgagctggtg
gtctccggcgacgacgcctgggccacgatcaacgagtacgtgggctcggtggcgcccgaa
ctggtgtcgaagctgacccgctaccagtcgcccaccggtccggacggccaagccggtccc
gacgtgttcgccgtgcaccgcatcgacgagcagctcgccaaggcactcgaccgcaaggtc
tggctgccctctggcggaacgctggtcatcgaccggaccgaggcgatgacggtggtcgac
gtcaacaccggcaagttcaccgggtccgggggcaacctcgaggagacggtgaccaagaac
aacttggaggccgccgaggagatcgtgcggcagcttcggctccgcgacatcggcgggatc
atcgtcatcgacttcatcgacatggtgttggagtccaaccgagacctggtgctgcgccgg
ttgaccgaggcgctgggccgggaccggacgcgtcatcaggtctctgaggtgacgtccctg
gggctggtgcagctgacccgtaagcgattgggcacggggctgatcgaagctttttcgacg
tcgtgtcagcactgcgccgggcgtggcatcgtgctgcatgccgacccggtggattcggct
gggccgggccgcaagtccgagccgggtggcagcactaccagccgtcgcagcaagcgctcg
aaaaagccgaaggtcgatgagccggcggtcgtcaaggttccggtgcacactccgggtgac
catccgatgttcaaggcgatggccgcggccagcgaccggcacgacgaggacgatgagcac
gagactgcgcccgacgccgacgagcaggtggtggtcctcaccgatcggagcgccgacggc
accgaggaggccgaaggcgccgacgaggtcggcgaggacgacctggaatccgacgcgacc
gatgaggaccgtgcggactcggatggggacgctgacgacgaggtcgtcgacgatgacgac
accgacgacgacgatgacgatgacgatgacgacgacgtcgaagaagtcgatctcgacgag
gacgacgatgacgacgatgacgatgacgacgtcgaagatgtcgatctcgatgacgatgac
gatgacgatgacgatgacgatgacgatgacgatgacgatgacgacgacgatgacaccgac
gatgacgatgacaccgacgatgacgatgacaccgacgatgacgacgacaccgacgatgac
gacgacaccgacgatgacgacgacaccgacgacgacgacgaagacctggacgtcatcgac
gaagccgacgatgtcgaggagcccgaagcgcctgttgcgctggtcgagcgtccgcggcgg
cggcgcgcggcggcccggcctgccggacctccgatctaa
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