Mycoplasma miroungirhinis: HLA92_01705
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Entry
HLA92_01705 CDS
T08086
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mmio
Mycoplasma miroungirhinis
Pathway
mmio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HLA92_01705 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmio03019
]
HLA92_01705 (rnr)
03016 Transfer RNA biogenesis [BR:
mmio03016
]
HLA92_01705 (rnr)
Enzymes [BR:
mmio01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HLA92_01705 (rnr)
Messenger RNA biogenesis [BR:
mmio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HLA92_01705 (rnr)
Transfer RNA biogenesis [BR:
mmio03016
]
Prokaryotic type
tRNA degradation factors
HLA92_01705 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
S1
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
QJR44144
UniProt:
A0A6M4JAX3
LinkDB
All DBs
Position
complement(372228..374339)
Genome browser
AA seq
703 aa
AA seq
DB search
MLIKPETLKENILKLLKNSQKPQDFIEIAKNLQISKRDNKELSKIIFELCDTHKIEKTQD
GFYFYLDFIKSDTYNISISTKRLGFVDFDIDKSALLLPFQLNAILDGDLVDVEIYSYNQD
NKILYRAYIKNIIEHKKQVIVGNFIKKQNDQIFFEAVDAKDSANFFINVPTKFYYDLKQF
VKVKVLAPRKNAKKVDLEFIEYIGKTDDKRIIEKKIIVQNNVDTNFSFEVLEEAKLLPKQ
ITSQDYEGRKNLENLFTVTIDGNDTKDFDDAISCLKTDSGYKLWVHIADVSHYVKENSFI
DQEALKRGTSIYLPDKVIPMLPFELSNGICSINPQQLRAVLTLELDLDEFGLNTKYQIYP
SIIKSNYRLTYDQVNDFYEGRFSFENTETNQMLTIAKEISLLIRKQKLLEGYVDFEIIEP
KIILNNEGDVIDIKLKQSGFSETMIEDFMVRANETVAKMMYDKKIPSIYRIHDLPSDEKL
YNLQQILNFLNIDIKVPFSGDSKEFAQMVLQLKEIKFDDFIKMYLLRTLQKAKYSEQNIG
HFGLASKFYSHFTSPIRRYPDLLLHRLIRNYIFNQTELKLEDKDTLSQKIHFISELNSDS
ENIALNVERNIVDLKKSEFFEKFVNTTIQATAISVEKFGIFFESPEYKTSILVRFEDMKN
EEMIQVSNLEAKSKIRQILAGNNYSIRITEIDPLKGNISAIIV
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgttaattaaacccgaaaccctgaaagaaaatattttaaaattactaaaaaattcgcaa
aaaccacaagattttattgaaatcgctaaaaatctacaaatttcaaaaagagataataaa
gaattatcaaaaattatttttgaactttgtgatacacataaaatagaaaaaacccaagat
gggttttatttctatttagattttattaaaagtgatacatataatatttctatttcaact
aaaagattaggttttgtggattttgatattgataaatcagctttattattaccatttcaa
ctcaatgctattttagatggtgatttagttgatgttgaaatttatagttataatcaagat
aataaaattttatatcgtgcatatattaaaaatattattgaacataaaaaacaagttatt
gttggtaattttataaaaaaacaaaatgatcaaatcttttttgaagcagttgatgctaaa
gatagtgcaaatttctttataaatgtgccgactaaattttattatgatttaaaacaattt
gttaaagttaaagtgcttgcaccaagaaaaaacgctaaaaaagttgatttagaatttata
gaatatattggtaaaacagatgataaaagaataatagaaaaaaaaataatcgttcaaaat
aatgttgatactaattttagtttcgaagtgttagaagaagctaaattacttcctaaacaa
ataactagtcaagattatgaaggtagaaaaaatcttgaaaatctttttacagttacaata
gatggaaatgatactaaagattttgatgatgcaattagttgtctaaaaacagattcaggt
tataaattatgagttcatattgctgatgttagccattatgtaaaagaaaatagttttata
gaccaagaagcattaaaaagaggaactagtatatatttaccagataaagttattccaatg
cttccatttgaattatctaatggtatttgtagtatcaatcctcaacaattaagagcagtt
ttaacattagaattagatttagatgaatttggtttaaatactaaatatcaaatttatcct
tcaatcattaaatcaaattatagacttacttatgatcaagttaatgatttttatgaagga
agatttagttttgaaaatactgaaactaatcaaatgttaacaattgcaaaagaaatttca
ttattaataagaaaacaaaaattattagaaggttatgttgatttcgaaattattgaacca
aaaattattttaaataatgaaggtgatgtaattgatattaaattaaaacaatcaggattt
agtgaaacaatgattgaagattttatggttcgagcaaatgaaacagttgcaaaaatgatg
tatgataaaaaaattccttcaatttatcgaattcatgatttaccttctgatgaaaaactt
tataatttacaacaaatattaaattttttaaatattgatattaaagttccattttcaggt
gatagtaaagaatttgcacaaatggttttacagttaaaagaaattaaatttgatgatttt
attaaaatgtatttactaagaactttacaaaaagcaaaatattcagaacaaaatattgga
cattttggtttagcaagtaaattttattcacattttactagtccaataagaagatatcca
gatcttcttttacaccgtttaattcgtaattatatttttaatcaaaccgaactaaaatta
gaagataaagatacattaagtcaaaaaattcattttatttctgaactaaatagtgattct
gaaaatattgctttaaatgtagaaagaaacattgttgatttaaaaaaatcagaatttttt
gaaaaatttgttaacacaacaattcaagcaacagcaatttcagttgaaaaatttggaatc
ttttttgaaagtccagaatataaaacttccattttagttcgttttgaagatatgaaaaac
gaagaaatgatacaagtaagtaatttagaagctaaatcaaaaatcagacaaatattagca
ggtaataattattcaattagaattactgaaatagatcctttaaaaggtaatataagcgca
ataatagtttag
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