Mycoplasma miroungigenitalium: HLA87_03375
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Entry
HLA87_03375 CDS
T08007
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mmir
Mycoplasma miroungigenitalium
Pathway
mmir03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmir00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HLA87_03375 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmir03021
]
HLA87_03375 (rpoC)
03400 DNA repair and recombination proteins [BR:
mmir03400
]
HLA87_03375 (rpoC)
Enzymes [BR:
mmir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HLA87_03375 (rpoC)
Transcription machinery [BR:
mmir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HLA87_03375 (rpoC)
DNA repair and recombination proteins [BR:
mmir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HLA87_03375 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QJR43800
UniProt:
A0A6M4JA51
LinkDB
All DBs
Position
763856..768256
Genome browser
AA seq
1466 aa
AA seq
DB search
MSRFQNKDETKLLIDKITLSLATDKDVTSWSNGEVTKPETINYKSYKPERDGLFDEIIFG
PTTDYKCPVCNTKYKRSDENTDCIRTPMCVKYKPKILPKITRRSRMGHISLKNPVVHFWF
FKIDHSIISKLLGLKVANSNRSVTKSELEKLIYYKSHIVLEDGGLKALKKNAIIDISDAA
IVYYEALKELKEKFDPNSEDEFDIEAYEIIDEAIEDLKEQATSKMGQDYGIDFYEYNDII
HEYSDARISTGSKAIEYLLEHVDPKEEAAKLEEEIAEINLQIAQNPSANAKIQERAKLYK
RLTVINSFIKSGQDPKSMLIYNLPVIPADLRPLVQLDGGRHSTSDINELYRRIIIRNNRL
KKWEETDAPMLIKQNEYRMIQEAVDSLIDNARKKPNPVASKDGRPFKSISDALTGKKGRF
RQNLLGKRVDYSGRSVIVVGPELKMHQVGIPREMAAKLFEPWIIRELIKCDKNNINSIKS
GKKAVENLDPIIWPYVEKAIEGRPVLLNRAPTLHRLSIQAYEPVLIRGKAIKLHPLSCTP
FNADFDGDQMAVHVPISPEATREARELMLASKNILGPKDGEPIINPGQDMILGLYYLTME
KAGAKGEGKFFSTYEDMVTAYENKAVSVHTRVVLPIEQANKKWINASEQNSYIVSTVGKF
MFNRAFPNSFEFIFGKFTTPEGKEIVHTSANGDELSRYLLPKGTNFPEHIAKMDINLPLS
KKDIAKIVRRVYDQYVGVVCMEDLAGVLNEINKDEIDKIFEKCAVLKGYNGEHISASHAE
ILTKFIIEEFNKIQYEVTMTQNNEDALWTINDYTKLLETVWFKYTNVVASVLDKIKSLGF
HFSTISGTTIAVSDVITLPTTKDKIKEGEEYIERLKAFFEEGMLTDDERYSLSIKKWAEI
KNSIEDELKQVTKSDPHNPLFMMFTSGARGNSSNFVQLAGMRGLMNNNVKILKADAENER
VVRSTVEIPVKSSFLEGLTAYEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQGIVV
REVDCGTDYGFVVKDIKDSKTNTVIESLAERIEGRFTNKPVLDQFGEVIIAANQLITPEI
ANRIVKAGVEAVEIRSVLSCYTRNGVCKKCYGKDLALNRVVNIGEAVGVVAAQSIGEPGT
QLTMRTFHTGGVAGVEDITGGFGRLMELIDAYDSPWGRPAIIAPGYGKVISITTPTEITN
RNIKIITAEILNDKGEKEIFDFETKADRRIVVKEGDKLIPGQKLVEGPIVLGDLLKYADT
RAVQNYLLKEVQKLYRLQGISIADKYIEIIIRQMLSKVMITDTGDSKFFSGSLVDIFAFQ
KESARLLAEGKKPPFGEVKIKGAKQTPLLSDSFLAAASYQETPKILVNASIGAQTDKLEG
LKENIILGHKIPAGTNSNFEAKEKYDIRDPRSYFSMKYDPQHEDITEKFATVDLDLVNSD
LDEIFSELDVQQVEDNFTEDIEHEFE
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgagtagatttcaaaataaagatgaaacaaaattgttaatcgataaaattactttatct
ttagcaaccgataaagatgttacatcttgatcaaatggtgaagttacaaaacctgaaacc
attaattacaaaagctacaaacctgaacgtgatggtctatttgacgaaattatttttggg
cctactactgactataaatgtccagtatgtaatacaaaatacaaaagaagtgacgaaaat
acagactgtattcgtacaccaatgtgtgttaaatacaaaccaaaaattctacctaaaatc
actcgtagaagcagaatgggacacatcagtcttaaaaaccctgttgttcacttttgattc
tttaaaattgaccactcaattatttcaaaacttttaggtttaaaagttgctaattcaaat
agatcagtaactaaatcagaattagaaaaattaatctactataaatctcacattgttttg
gaagatggtggattgaaagcgcttaaaaagaatgcaattattgatatttctgatgccgct
attgtttactatgaagcattgaaagaactgaaagaaaaatttgatcctaatagcgaagat
gaatttgatattgaagcttacgaaattattgatgaagcaattgaagacttaaaagaacaa
gcaacatcaaaaatgggtcaagattatggtattgacttctatgaatacaatgatattatt
cacgaatattctgatgctcgtatctcaactggttcaaaagcaattgaatacttactagaa
catgttgatccaaaagaggaagcagcaaaactggaagaagaaattgctgaaattaacttg
caaattgctcaaaacccatcagctaatgctaaaattcaagaaagagcaaaactatataaa
cgtttaactgtaattaactcatttattaaatcaggtcaagatcctaaatcaatgttaatt
tataacttacctgttattcctgctgatttacgtccattagttcaacttgatggtggtcgt
cattcaacaagtgatattaatgaactttatcgtcgtattattattagaaacaatcgtttg
aaaaaatgagaggaaacagatgctccaatgttgattaaacaaaatgagtatcgtatgatt
caagaagcggtggattcgttaattgataatgctcgtaaaaaacctaatcctgttgcatct
aaagatgggagaccatttaaatccatttctgatgcattaactggtaaaaaaggtcgtttc
cgtcaaaacttgcttggtaaacgtgttgactattcagggcgttcagttattgttgtcggt
ccagaacttaaaatgcaccaagttggtattcctagagaaatggcagctaaattatttgaa
ccttgaattatcagagaattaatcaaatgtgataaaaacaatataaattcaatcaaatct
ggtaaaaaagccgttgaaaacctagaccctatcatttgaccatatgtggaaaaagcgatt
gaaggtcgcccagtgctattgaaccgtgcgcctacattgcaccgtttaagtattcaagct
tacgaaccagttctaattagaggtaaagccattaaacttcacccactttcatgtactcca
tttaacgcggactttgatggggaccaaatggctgttcacgtaccaattagtcctgaagct
actcgagaagcacgcgaattaatgttagcttctaaaaacattttagggcctaaagatggt
gagcctattatcaaccctggtcaagatatgattttaggtttatactacttaacaatggaa
aaagccggcgcaaaaggcgaaggtaaattcttctcaacatatgaagatatggttacagca
tatgaaaataaagctgttagtgttcatactagagttgttttacctattgaacaagccaat
aaaaaatgaatcaatgcttctgaacaaaattcttacattgtttctacagttggtaaattc
atgtttaaccgtgcatttccaaattcttttgaattcatttttggtaaattcacaactcct
gaaggtaaagaaatagttcacacttctgcaaatggagacgaattatcaagatacttattg
ccaaaaggtacaaatttcccagaacatattgcaaaaatggacattaacctacctttatct
aaaaaagatattgccaaaattgttcgtagagtttatgaccaatatgttggtgttgtttgc
atggaagatttagcaggcgttttaaatgaaataaacaaagacgaaattgataaaatcttt
gaaaaatgtgctgtattaaaaggttataatggtgaacatatcagtgcctcacatgccgaa
attctaactaaattcattattgaagaatttaacaaaattcaatatgaagttactatgact
caaaacaatgaggatgctttatgaaccattaatgattacacaaaattattagaaactgtt
tgatttaaatatactaatgttgtcgctagtgttcttgacaaaattaaatcattaggtttc
cacttctcaacaatttcaggtacaactattgccgttagcgatgttattaccttaccaaca
accaaagataaaattaaagaaggtgaagaatacatcgaaagattaaaagccttttttgaa
gaaggtatgttgacagatgacgaaagatattcactttcaatcaaaaaatgagctgaaatt
aaaaattctattgaagatgaactgaaacaagttactaaatctgacccacataaccctcta
tttatgatgtttacatctggagcgcgtggtaactcaagtaacttcgttcaactagctggt
atgcgtggtttaatgaacaacaacgttaaaatccttaaagccgacgctgaaaacgaacgt
gtcgttcgttcaacagttgaaatcccagttaagtcatcattcctagaaggtcttacagcc
tacgaattttattcatcaactcacggggctcgtaaaggactaaccgatactgctcttaac
acagcaaaatcaggttacttaactcgtcgtttggtcgatgttgctcaaggtattgtagtt
cgtgaagttgattgtggtactgactacggtttcgttgttaaagatattaaagactcaaaa
accaatacagttattgaatcattggctgaaagaattgaaggtcgctttactaacaaacct
gttttagaccaatttggtgaagtgattattgctgcaaatcaattaattactccagaaatt
gcaaacagaatagttaaagctggtgttgaagccgttgaaattagatctgttttatcttgc
tacacacgcaatggtgtatgtaaaaaatgttatggtaaagacctagctttaaaccgtgtt
gttaacatcggtgaagcggtcggagttgttgctgctcaatctattggtgagcctggtaca
cagctaaccatgcgtacattccacactggtggtgttgcaggggttgaagatattacgggt
ggtttcggtcgtttgatggaacttattgacgcctatgactcaccatggggtagaccggca
attattgctcctggttatggtaaagtaatttctattactactccaaccgaaattacaaat
agaaatattaaaataattactgctgaaatcttaaatgataaaggcgaaaaagaaatcttt
gattttgaaaccaaagctgatcgtagaattgttgttaaagaaggtgataaattaatccct
ggacaaaaacttgttgaaggtcctatcgttttaggtgatttattaaaatacgctgataca
agagcggtacaaaattacctattaaaagaagttcaaaaactatatcgtctacaaggtatt
tcaattgcagataaatatatcgaaattattattcgtcaaatgttgtcaaaagtgatgatt
acagatactggagattctaaattcttctcaggttctttagtggatatttttgcattccaa
aaagaatcagctcgcttgttagcagaaggtaaaaaacctccatttggagaagttaaaatt
aaaggtgctaaacaaactcctcttctttctgactcattcctcgctgcagcttcttaccaa
gaaactcccaaaattttggttaacgcttcaatcggagcccaaacagataaattggaaggt
ctaaaagaaaatattattctaggacacaaaatccctgctggtacaaatagcaattttgaa
gctaaagaaaaatacgatattcgtgacccaagatcatacttttcaatgaaatacgatcct
caacacgaagacataacagaaaaatttgctactgtcgacttagatttagttaattctgac
ctagatgaaatcttttctgaattagacgttcaacaagttgaagataactttacagaagac
attgaacacgaatttgaataa
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integrated database retrieval system
