Micromys minutus (European harvest mouse): 308426891
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Entry
308426891 CDS
T12044
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
mmiu Micromys minutus (European harvest mouse)
Brite
KEGG Orthology (KO) [BR:
mmiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmiu03000
]
308426891 (SOX18)
Transcription factors [BR:
mmiu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
308426891 (SOX18)
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GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
308426891
NCBI-ProteinID:
XP_080780988
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All DBs
Position
11:complement(59539148..59540910)
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AA seq
377 aa
AA seq
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MQRSPPGYGAQDNPPSRRDCAWAPGVGAAAEPRGLPVSSASPTSPASPSSLPRSPPRSPE
SGRYGFGRGERQTAEELRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKEL
NTAEKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQARKVRRLEPGLLLPGLVQPSAPPES
FAAAPGSARSFRELPTLGAEFDGLGLPTPERSPLDGLEPGEASFFPPPLAPEDCALRAFR
APYAPELARDPSFCYGSPLAEALRTAPPAAPLAGLYYGTLGTPGPFPNPLSPPPEAPSLE
GTEQLEPTTDLWADVDLTEFDQYLNCSRTRPDATSLPYHVALAKLGPRAMSCPEESSLIS
ALSDASSAVYYSACISG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatcgccgcccggctacggcgcacaggacaacccgccctcccgccgcgactgt
gcatgggccccgggagtcggggccgctgctgagccgcgcggcctccccgtcagcagcgcc
tcgcccacctcgcccgcctcgccatccagccttccgcggagcccaccgcgcagccccgag
tcagggcgctatggctttggccgcggagagcgccaaacggccgaggaattgcgcatccgg
cggcccatgaacgccttcatggtttgggcgaaggacgagcgcaagcgactggcgcaacaa
aatccggatctgcacaacgcagtgctgagcaagatgctgggcaaagcgtggaaggagctg
aacacggcggagaagcggcctttcgtggaagaggccgaacggctgcgtgtgcagcacttg
cgtgaccatcccaactacaagtatcggcctcgccgcaaaaaacaggcgcgcaaggtccgg
aggctggagcccggcctcttgctcccgggcctcgtgcagccgtctgcgccgcccgagtct
ttcgctgcagcaccaggctcagctcgctccttccgcgagctacccactctgggtgcggag
ttcgatggcttggggctacccacgcccgagcgctcgcctctggacggcctggagcctggc
gaggcctccttcttcccaccgcctttggctcccgaggactgcgctttgcgggctttccgg
gcgccctatgcccccgagctggcacgggacccgagcttctgctatgggtcgcccttggct
gaggcgctcaggacagcgccgcctgctgcgccactcgcgggcctctactatggcaccctg
ggcactccaggcccatttcccaatcctctgtcaccaccacctgaggccccgtctcttgag
ggcacagagcaactggagcctaccaccgacctttgggccgatgtggacctcaccgaattc
gaccagtatctcaattgcagccggactcgaccggatgccacttcactcccctaccacgtg
gcactggccaaactaggtccgcgtgccatgtcttgtccagaggagagcagcctcatttct
gcgctgtctgacgccagcagcgcggtctattacagcgcctgcatctcaggctag
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