Micromys minutus (European harvest mouse): 308432002
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Entry
308432002 CDS
T12044
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform 1
KO
K08331
autophagy-related protein 13
Organism
mmiu Micromys minutus (European harvest mouse)
Pathway
mmiu04136
Autophagy - other
mmiu04140
Autophagy - animal
mmiu04211
Longevity regulating pathway
mmiu05010
Alzheimer disease
mmiu05014
Amyotrophic lateral sclerosis
mmiu05016
Huntington disease
mmiu05017
Spinocerebellar ataxia
mmiu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mmiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
308432002 (ATG13)
04136 Autophagy - other
308432002 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
308432002 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
308432002 (ATG13)
05014 Amyotrophic lateral sclerosis
308432002 (ATG13)
05016 Huntington disease
308432002 (ATG13)
05017 Spinocerebellar ataxia
308432002 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
308432002 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmiu04131
]
308432002 (ATG13)
03029 Mitochondrial biogenesis [BR:
mmiu03029
]
308432002 (ATG13)
Membrane trafficking [BR:
mmiu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
308432002 (ATG13)
Atg1 complex
308432002 (ATG13)
Mitochondrial biogenesis [BR:
mmiu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
308432002 (ATG13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
308432002
NCBI-ProteinID:
XP_080787778
LinkDB
All DBs
Position
17:complement(1768187..1802837)
Genome browser
AA seq
549 aa
AA seq
DB search
METGLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALSGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTLTLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAEDAGVT
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLSSSR
LSYQPAVLGLGSADLAYPVVFTAGLNTTHAHQPMIPGKEGGMPLASNHPAHGAQADQERQ
VMHMPSDGTHCAATPSSSEDTETVSNSSEGRASPHDILETIFVRKVGAFVNKPINQVTLT
SLDIPFAMFAPKNLELEDADPMVNPPDSPETTSPLHGSLHSDGSSGGSSGNTHDDFVMID
FKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDFGAQSMAEDLDSLPEKLAVHEKNVRE
FDAFVETLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggaaactggtctcagttcccaggacagaaaggacctggacaagtttattaagtttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggagaaaagatttgcacccgt
tcatcatcttcaccaacgggttcagattggtttaatttagcaatcaaagacatcccagaa
gtcacccatgaagcaaagaaggccctgtccgggcagctgcctgctgtggggcgatctatg
tgtgtggagatctcactcaagacgtctgagggagattccatggagttggaaatttggtgt
cttgaaatgaacgagaagtgtgacaaagaaatcaaagtttcctacactgtatacaaccga
ttgtcactgctgctgaagtctcttctcgctattacaagggtgacgccagcctatagactc
tccaggaagcaagggcatgaatatgtaattttgtacaggatttattttggagaagttcaa
ctgaatggcttaggagaaggcttccagacagtccgggttggaacagtgggcacccctgtg
ggcaccctcactctttcctgtgcttatagaattaacttggccttcatgtctaccaggcag
tttgagaggaccccacctatcatggggattatcattgatcactttgttgaccgtccctat
cccagctcctctcctatgcacccttgcaattacagaactgctgaggatgctggagtcaca
tacccatcagtggaagactctcaggaagtgtgtaccacatctttttccacatcccctccc
tcccagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtgacg
gacactctgagggtccccatggcaggactggccttttcccatcaactctcaagctctcgc
ctttcctatcagcctgctgtcctgggccttggatcggctgacctggcttatccagtagtg
tttactgctggcttaaacactacacatgctcaccagccgatgattcctgggaaggaaggt
ggaatgcctcttgcttccaaccaccctgctcatggtgcccaggctgatcaggagagacag
gtgatgcacatgccttctgatgggacccactgtgctgccacaccctcgagcagtgaggac
acggagacagtatctaacagcagtgaaggacgggcctcaccccatgacatcttggagact
atctttgtccgaaaagtgggagcatttgtcaacaaacccatcaatcaggtgactctgacg
agtttggacataccatttgccatgtttgctcccaagaatttggagctggaggatgctgat
cctatggtgaatcccccggactccccagagaccacctctcccctccatggcagcctgcac
tcagatggctccagtgggggcagcagtggcaacacacatgacgactttgttatgattgac
tttaaaccagctttttctaaagacgacattcttccaatggacttggggaccttttaccgt
gaatttcagaatccccctcagctgagcagcctctccatagattttggagctcagtctatg
gcggaagacttggactccttaccagagaagctggccgtgcatgagaagaatgtccgagaa
tttgatgcctttgtggaaaccctacagtaa
DBGET
integrated database retrieval system
