Micromys minutus (European harvest mouse): 308437816
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Entry
308437816 CDS
T12044
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform 1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
mmiu Micromys minutus (European harvest mouse)
Pathway
mmiu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mmiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
308437816 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmiu04040
]
308437816 (SCN8A)
Ion channels [BR:
mmiu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
308437816 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
IQ
ATP-synt_B
GPHH
Lustrin_cystein
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
308437816
NCBI-ProteinID:
XP_080795121
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All DBs
Position
27:complement(<20208559..>20295890)
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AA seq
1989 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
IRRIAIKILIHSFFSMIIMCTILTNCVFMTFSNPPDWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTRGF
DWEEYINNKTNFYMVPGMLEPLLCGNSSDAGQCPEGFQCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGEDGVGSPRSSSEL
SKLSSKSAKERRNRRRKRKQKELSEGEEKGDPEKVFKSESEDGMRRKAFRLPDNRIGRKF
SIMNQSLLSIPGSPFLSRHNSKSSIFSFRGPGRFRDPGSENEFADDEHSTVEESEGRRDS
LFIPIRARERRSSYSGYSGYSQCSRSSRIFPSLRRSVKRNSTVDCNGVVSLIGPGSHIGR
LLPEVKIDKAATDSATTEVEIKKKGPGSLLVSMEQLASYGRKDRINSVMSVVTNTLVEEL
EESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAM
EHHPMTPQFEHVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMEL
GLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVV
GMQLFGKSYKECVCKINQECKLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAM
CLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWTK
VKVHAFMQAHFKQREADEVKPLDELYEKKANCIANHTGVDIHRNGDFQKNGNGTTSGIGS
SVEKYIVDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDTSSS
EGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNIEEGLGKSWWILRKTCF
LIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWT
AYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEG
MRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEIRFEIDIVNN
KTDCEKLMEGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQP
DYEGNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKIGFPSDIFMTEEQKKYYNA
MKKLGSKKPQKPIPRPLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQME
NILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFV
SPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMS
NFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSG
FKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEI
WEKFDPDATQFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAF
TKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGHLA
RRGFICRKITSNKLENGGTHREKKESTPSTASLPSYDSVTKPDKEKQQRAEEGRRERAKR
QKEVRESKC
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcggctgctcgcaccaccaggccctgatagtttcaagcccttcacccctgag
tcgctggcaaacatcgagaggcgtatcgctgagagcaagctcaagaaaccacccaaggcg
gatggcagccaccgggaggatgacgaagacagcaagcccaagcccaacagtgacctggag
gcggggaagagtttgcctttcatctacggggacatcccgcaaggcctggtcgccgttccc
ctggaggactttgacccgtactatttgacgcagaaaacctttgtagtattaaacagaggg
aaaactctcttcagatttagcgccacgcctgccttgtacattttaagtccttttaacctg
ataagaagaatagctattaaaattttgatacattcattcttcagcatgatcatcatgtgc
accatcctgaccaactgtgtgttcatgacctttagtaaccctcccgactggtccaagaat
gtggagtacacattcacagggatttacacatttgaatcactagtgaaaatcatcgcaaga
ggtttctgcatagacggcttcaccttcttacgagacccgtggaactggttagacttcagt
gtcatcatgatggcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgaga
acattcagggttctccgagctttgaaaactatctctgtaattccaggcctgaagacaatt
gtgggcgccctaatccagtctgtgaagaagctgtcggatgtgatgatcctgacagtgttc
tgcctgagtgtctttgccctgattggcctgcagcttttcatggggaaccttcgaaacaag
tgtgttgtgtggcccataaacttcaatgagagctaccttgagaacggtaccagaggcttt
gactgggaagagtacatcaacaataaaacaaacttttacatggttcctggcatgctagaa
cccttgctctgcggaaacagttccgatgctgggcaatgcccagagggattccaatgcatg
aaagcaggaaggaaccccaactatggttacaccagcttcgataccttcagctgggccttc
ctggcattgtttcgccttatgacccaggactattgggagaacttataccagctgaccttg
cgagcagctggaaaaacgtacatgatcttctttgtcttggtcatcttcgtgggttctttc
tatctggtgaacttgatcttggctgtggtggccatggcttacgaagagcagaatcaggcg
acactggaggaggcagagcagaaagaggccgagttcaaggccatgctggagcagcttaag
aagcagcaggaggaggcgcaggctgctgccatggccacttcggcgggcactgtctcggaa
gatgccattgaagaggaaggggaggatggggtgggctctccacggagttcatctgaactg
tctaaactgagctccaagagcgcgaaggagcggcggaaccggcggaggaagaggaagcag
aaggagctctctgaaggggaggagaaaggggaccccgagaaggtgtttaagtcagagtcg
gaagatgggatgagaaggaaggccttccggttgccagacaacaggatagggaggaaattt
tcaatcatgaatcagtcgctgctcagcatcccaggctcgcccttcctctcccgacataac
agcaaaagcagcatcttcagcttccggggcccggggaggttccgggaccccggctcggag
aatgagttcgcggacgacgagcacagcacggtggaggagagcgagggccggcgcgactcg
ctcttcatcccgatccgcgcccgcgagcgccgcagcagctacagcggctacagcggctac
agccagtgcagccgctcgtcacgcatcttccccagcctgcggcgcagcgtgaagcgcaac
agcaccgtggactgcaacggcgtggtgtcactcatcgggcccggctcccacatcgggcgg
ctcctgcctgaggtgaaaatagataaggcagctacggacagcgcaacaactgaggtggaa
attaagaagaaaggccccggatctcttttagtgtccatggaacagctggcctcctacgga
cggaaggaccgaatcaacagcgtaatgagcgtggtcacaaacacgctagtggaagagctg
gaagagtctcagagaaagtgcccgccatgctggtacaagtttgccaacactttcctcatc
tgggagtgtcacccctactggatcaaactgaaggagatcgtgaacttgatcgtcatggat
cctttcgtagatttggccatcaccatttgcattgttctgaacacactgttcatggcaatg
gagcaccaccccatgacgccacaattcgagcacgtgttggccgtgggaaatctggtgttc
accgggatcttcacggcggaaatgtttctgaagctcatagccatggacccttactattat
ttccaagaaggctggaacatttttgatggatttattgtctccctcagtttgatggagctg
ggtctcgcagacgtggaggggctctcggtgctgcggtctttccgactgctccgagtgttc
aaactggccaagtcctggcccaccctgaacatgctgatcaagatcatcgggaactccgtt
ggcgccctaggcaacctgaccctggtgctggccatcatcgtcttcatcttcgccgtggtg
gggatgcagctctttggaaagagttacaaggagtgcgtctgtaagatcaaccaggagtgc
aagctcccgcgctggcacatgcacgacttcttccactccttcctcatcgtcttccgagtg
ctgtgtggggagtggatcgagaccatgtgggactgcatggaggtggccgggcaggccatg
tgcctcattgtcttcatgatggtcatggtcatcggcaacttggtggtgctgaacctcttc
ctcgccttgctcctgagctccttcagcgcagacaacctggcggccacagacgacgacggg
gaaatgaacaacctgcagatctccgtgatccggatcaagaagggcgtggcctggaccaaa
gtgaaggtacacgccttcatgcaggcgcacttcaagcaacgggaggcggacgaggtgaag
cctctggacgagctgtacgagaagaaggccaactgcatcgccaaccacaccggtgtggac
atccaccgcaacggggacttccagaagaacgggaacggaaccaccagcggcatcggcagc
agcgtggagaagtacatcgtcgacgaggaccacatgtccttcattaacaacccaaacctg
accgtccgggtgcccatcgctgtgggcgagtctgacttcgagaacctcaacacagaggac
gttagcagcgagtcagaccccgaaggcagcaaagataaactggacgacaccagctcctca
gaaggaagcaccatcgacatcaagcccgaggtggaagaagtccccgtggagcagcccgag
gaatacctggatccggacgcctgcttcacagagggttgcgtccagcggttcaagtgctgc
caggtgaacatcgaggaaggactaggcaagtcgtggtggatcctgcggaaaacctgcttc
ctcattgtagagcacaattggtttgagaccttcatcatcttcatgatcctgctaagcagt
ggtgccctggccttcgaggacatctacattgagcagaggaagaccatccgcaccatcctg
gagtatgcagacaaggtgttcacctacatcttcatcctggagatgctgctcaagtggaca
gcctacggcttcgtcaagttcttcaccaatgcctggtgctggttggacttcctcattgtg
gctgtctctttagtcagccttatagctaatgccctgggctactcggaactaggtgccata
aagtcccttaggaccctaagagctttgagacccttaagagccttatcacgatttgaaggg
atgagggtggtggtgaatgccttggtgggcgccatcccctccatcatgaatgtgctgctg
gtgtgtctcatcttctggctgattttcagcatcatgggagttaacctgtttgcggggaaa
taccactactgctttaatgagacttctgaaatccggttcgaaattgatattgtcaacaat
aaaactgactgtgagaagctcatggagggtaacaacacagagatccgatggaagaacgtc
aagatcaactttgacaatgtcggagcggggtacctggcccttcttcaagtggcaaccttc
aaaggctggatggacatcatgtatgcagctgtggactcccgaaagccggacgagcagccc
gattacgagggcaacatctacatgtacatctactttgttatcttcatcatcttcggctcc
ttcttcaccctcaacctgttcatcggtgtcatcattgataacttcaatcaacagaagaaa
aagataggtttcccgtccgacatcttcatgacggaggaacagaagaagtactacaatgcc
atgaagaagctgggctccaagaagccacagaagcccatcccccgacccttgaacaagatc
caagggattgtctttgatttcgtcactcaacaagcctttgacattgtgatcatgatgctc
atctgccttaacatggtgacaatgatggtggagacagatactcagagcaagcagatggag
aacattctttactggattaatctggtcttcgtcatcttcttcacctgcgagtgtgtgctc
aaaatgtttgccttgagacactactatttcaccatcggctggaacatctttgactttgtg
gtggtcatcctctccattgtggggatgttcctggctgatatcattgagaagtacttcgtc
tccccgaccctcttccgagtcatccgattggcccgcatcgggcgcatcttgcgtctgatc
aagggggccaaagggatccgcaccctgctctttgccttaatgatgtccctgcctgccctg
ttcaacatcggcctcctgctcttcctggtcatgttcatcttctccatctttgggatgtct
aacttcgcatacgtgaaacacgaggccggcattgacgacatgttcaacttcgagacattt
ggcaacagcatgatctgcctgttccagattacaacctctgctggctgggatggcctgctg
ctgccaatcctgaaccgcccccctgactgtagcttggacaaggagcacccaggcagtggc
ttcaaaggggactgcgggaacccctcagtgggcatcttcttctttgtcagctacatcatc
atctcctttctgattgtggtgaacatgtacatcgccattatcttggagaacttcagtgtg
gccacagaggagagcgccgatcctctgagtgaggacgacttcgagactttctacgagatc
tgggagaagtttgaccccgatgccacccagttcattgagtactgtaagctggcggacttc
gccgacgccctggagcatccgctccgagtacccaagcccaacaccattgaactcatcgcc
atggacctgcccatggtgagcggagaccgtatccactgcttggacatccttttcgccttc
accaagcgggtcctgggagacagtggggagttggacatcctgcggcagcagatggaggag
cggttcgtagcatccaatccttccaaagtgtcttacgagcctatcacaaccactctgcgg
cgtaagcaggaggaggtgtctgcagtggtcttgcagcgtgcctacaggggacacttggct
aggcggggcttcatctgcagaaagatcacttccaacaagctggagaatggaggcacacac
cgggagaagaaggagagcaccccgtccacagcctccctcccatcttatgacagcgtcaca
aagcccgacaaggaaaaacagcagcgtgcggaggagggcagaagggaaagagccaagagg
caaaaagaggtcagggagtccaagtgctag
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integrated database retrieval system
