Micromys minutus (European harvest mouse): 308439227
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Entry
308439227 CDS
T12044
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform 1
KO
K23625
ataxin-2
Organism
mmiu Micromys minutus (European harvest mouse)
Pathway
mmiu05014
Amyotrophic lateral sclerosis
mmiu05017
Spinocerebellar ataxia
mmiu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mmiu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
308439227 (ATXN2)
05017 Spinocerebellar ataxia
308439227 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
308439227 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmiu03019
]
308439227 (ATXN2)
Messenger RNA biogenesis [BR:
mmiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
308439227 (ATXN2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
308439227
NCBI-ProteinID:
XP_080797100
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All DBs
Position
29:complement(26506846..26593767)
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AA seq
1137 aa
AA seq
DB search
MSLKPQPQPPAPASGRKPGGGLLSSPCSSPASAASTSSSVVPVPAAPVASSSAAAGGGRP
GLGRGRNSNKGLPQPTISFDGIYANVRMVHILTSVVGSKCEVQVKSGGIYEGVFRTYSPK
CDLVLDAAHEKSTESSSGPKREEIMESVLFKCSDFVVVQFKDTDSSYARRDAFTDSALSA
KVNGEHKEKDLEPWDAGELTASEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLS
SYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNCSD
REGHGTNTRENKYIPPGQRNREVISWGSGRQSSPRMGQPGPGSMPSRAASHTSDFNPNAG
SDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPS
AHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSMSSGLEFVSHNPPSEAAA
PPVARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNSPSGPVLASPQAGIIPAEAV
SMPVPAASPTPASPASNRALTPSIEAKDSRLQDQRQNSPAGNKENIKARETSPSFSKAEN
KGMSPVVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLSKNREGEKSRDLMKDKTEASA
KDGFIDSSSSSSNCTSGSSKTNSPSVSPSVLSNAEHKRGPEVTSQGVQTSSPACKQEKDD
REEKKDTTEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPAPVY
TQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQDQHHQSTM
MHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARM
MAPPAHAQPGLVSSSAAQFGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHP
NATLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHA
GLAPTPPSMTPASNTQSPQSSFPAAQQTVFTIHPSHVQPAYTTPPHMAHVPQAHVQSGMV
PSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaagccgcagccgcagccacccgcgcccgccagtggccgcaagcccggcggc
ggcctgctctcgtcgccctgctcctcgccggcctcggccgcgtcgacctcgtcttccgtg
gtgccggtcccggccgcgccagtggcgtcttcctcggcggccgcgggcggcgggcgtccc
ggcctgggcagaggtcggaacagcaacaaaggactgcctcagcccacgatttcttttgac
ggaatctatgcaaatgtgaggatggttcatatactgacatcagttgttggatcaaagtgt
gaagtacaagtgaaaagcggtggcatctatgaaggagtgtttagaacatacagtcctaag
tgtgatttggtacttgatgctgcacatgagaaaagtacagaatccagttccgggccaaaa
cgtgaagaaataatggagagtgttttgttcaaatgctcagacttcgttgtggtacagttt
aaagatacagactccagttatgcacgaagagatgcttttactgactctgctctcagcgct
aaagtgaatggtgagcacaaggagaaggacctggaaccctgggatgcaggggagctcaca
gccagcgaggagctggaggctctggagaatgatgtgtctaatggatgggatcccaacgat
atgtttcgatataatgaagaaaattatggtgtggtgtccacatatgatagcagtttatct
tcatatacggttcctttagaaagggacaactcagaagaatttctaaaacgggaggcaagg
gcaaatcagttagcagaagaaatcgaatccagtgctcagtacaaagctcgtgtggccctt
gagaatgatgaccggagtgaggaagaaaaatacacagcagtccagcgaaactgcagtgac
cgggaggggcatggaaccaacactagggaaaataaatatattcctcctggacaaagaaac
agagaagtcatatcctggggaagtgggagacagagctcaccacgaatgggccagcctgga
ccaggctccatgccatcaagagctgcttctcacacttcagatttcaacccgaacgctggc
tcagaccaaagagtagttaacggaggtgttccctggccatcgccttgcccatctccttcc
tctcgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgggcagccacc
cctacacggccgccctccaggcccccctcgaggccatccagacccccgtctcacccctct
gctcatggttctccagctcctgtctctactatgcctaaacgcatgtcttcagaaggtcct
ccaaggatgtctccaaaggcacaacggcaccctcggaatcacagagtctccgctgggaga
ggctccatgtctagtggcctagaatttgtatcccacaatcccccaagtgaagcagctgct
cctccagtggcaaggactagtcctgcagggggaacatggtcctcagtggtcagtggggtt
ccaaggttatctcccaaaactcacagacccaggtctcccaggcagaacagcattggaaac
tcacccagtgggcctgtgcttgcttctccccaagctggcatcatccctgctgaagccgtt
tccatgcctgttcccgctgcatctcctactcctgccagccctgcatccaacagagctctg
accccatctattgaggcaaaagattccaggcttcaagatcagaggcagaactctcctgca
gggaataaagaaaatattaaagcacgtgaaacatcacctagcttttcaaaagctgaaaac
aaaggtatgtcaccagttgtttctgaacacagaaaacagatcgatgatttaaagaagttt
aagaatgattttaggttacagccaagttctacatctgaatctatggatcaactactaagc
aaaaacagagaaggagaaaagtcacgagatttgatgaaagataaaacggaagcaagtgct
aaggatggttttattgacagcagcagcagcagcagcaactgcaccagtggcagtagcaag
accaacagccccagcgtctccccttccgtgcttagtaatgcagagcacaagagggggcct
gaggtcacgtcccaaggggttcagacttccagtccagcctgcaaacaagaaaaggatgac
agagaagagaagaaagacacaactgaacaagttaggaagtcaacattgaatcccaatgca
aaggagttcaaccctcgctctttctctcagccaaagccttctacaaccccaacgtcgcct
cggccccaagcacaacccagcccgtccatggtgggtcatcagcagccagctccagtgtac
actcagcctgtgtgttttgcacccaatatgatgtatcccgtcccagtgagcccgggtgtg
caacctttatacccaatacctatgacgcctatgccagtgaaccaagccaagacatataga
gcaggtaaagtaccaaatatgccccaacagcgacaagaccagcaccatcaaagcaccatg
atgcaccctgcctctgcagcagggccgcccatcgtagccaccccacctgcttattccact
cagtacgttgcctacagccctcagcagttccctaatcagcctctggtccagcatgtgcca
cattatcagtctcagcatccccacgtgtacagtcctgtcatacaaggtaatgccaggatg
atggcaccaccagcacatgctcagcctggcttagtgtcttcttcagctgctcaattcggc
gctcacgagcagacgcatgcgatgtatgcatgtcccaaattaccatacaacaaggagaca
agcccttctttctactttgccatttccaccggctccctcgctcagcagtatgcacatccc
aatgccaccctgcatccacatactccccatccgcagccttcggccactcccaccggacag
cagcaaagccagcatggtggaagtcaccctgcacccagtcctgttcagcatcatcagcac
caagctgcccaggctcttcatctggccagtccacagcagcagtcggccatttatcatgcg
gggctggcaccaacaccaccttccatgacacctgcctctaatacacagtctccacagagc
agtttcccagcagcacaacagacagtcttcaccatccatccttctcatgttcagccagca
tacaccacaccaccccacatggcccacgtacctcaggctcatgtacagtcaggaatggtt
ccttctcatccaactgcccatgcgccaatgatgctaatgacgacacagccacccggcggt
ccccaggccgccctcgctcaaagtgcactacagcccattccagtctcgacaacagcgcat
ttcccctatatgacgcacccttcagtacaagcccaccaccaacagcagttgtaa
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