Methanosarcina mazei S-6: MSMAS_0622
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Entry
MSMAS_0622 CDS
T04532
Name
(GenBank) Archaeal transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mmj
Methanosarcina mazei S-6
Pathway
mmj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSMAS_0622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmj03021
]
MSMAS_0622
Transcription machinery [BR:
mmj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
MSMAS_0622
Prokaryotic type
Archaeal type
TFE
MSMAS_0622
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Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HVO_2753_ZBP
RepL
Zn_Ribbon_TF
ACC_epsilon
Motif
Other DBs
NCBI-ProteinID:
AKB63818
UniProt:
A0A0E3RI12
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All DBs
Position
complement(752007..752501)
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AA seq
164 aa
AA seq
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MVDLNDKVIRGYLRSLVGDDGLKMIEQMPEGNVTDEEIAAKTGVLLNTVRRTLFILYENK
FAIVVRERDSNSGWLTYLWHLDFSDIEHQLMREKKRLLRNLKTRLEFEENHVFYVCPQGC
VRLLFDEATETEFLCPMCGEDLVYYDNSRFVGVLKKRVEALSSA
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgatttaaatgacaaggtaattagaggatacctcaggagccttgtaggggatgac
gggcttaaaatgatagaacagatgcccgaaggcaatgtcacggatgaagaaattgcggcg
aagaccggagttctgctgaataccgtgagaagaactctttttatactttatgagaataaa
tttgcaatagttgtaagggaaagagattcaaatagcggatggctgacttatctctggcat
ctggacttttccgacatagagcaccagcttatgagggaaaagaaaagactgctaaggaat
ctgaagacccgccttgaatttgaagaaaatcatgtattttacgtttgtcctcagggttgt
gttcgccttctttttgacgaagcaacggaaacggaatttctctgcccaatgtgcggagaa
gacctggtttactatgacaactcccgttttgtgggagttctgaaaaagcgcgtagaagct
ttgagttccgcataa
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