KEGG   Methanosarcina mazei S-6: MSMAS_0622
Entry
MSMAS_0622        CDS       T04532                                 
Name
(GenBank) Archaeal transcription factor E
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
mmj  Methanosarcina mazei S-6
Pathway
mmj03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mmj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MSMAS_0622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmj03021]
    MSMAS_0622
Transcription machinery [BR:mmj03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     MSMAS_0622
 Prokaryotic type
  Archaeal type
    TFE
     MSMAS_0622
SSDB
Motif
Pfam: TFIIE_alpha HVO_2753_ZBP RepL Zn_Ribbon_TF ACC_epsilon
Other DBs
NCBI-ProteinID: AKB63818
UniProt: A0A0E3RI12
LinkDB
Position
complement(752007..752501)
AA seq 164 aa
MVDLNDKVIRGYLRSLVGDDGLKMIEQMPEGNVTDEEIAAKTGVLLNTVRRTLFILYENK
FAIVVRERDSNSGWLTYLWHLDFSDIEHQLMREKKRLLRNLKTRLEFEENHVFYVCPQGC
VRLLFDEATETEFLCPMCGEDLVYYDNSRFVGVLKKRVEALSSA
NT seq 495 nt   +upstreamnt  +downstreamnt
ttggtcgatttaaatgacaaggtaattagaggatacctcaggagccttgtaggggatgac
gggcttaaaatgatagaacagatgcccgaaggcaatgtcacggatgaagaaattgcggcg
aagaccggagttctgctgaataccgtgagaagaactctttttatactttatgagaataaa
tttgcaatagttgtaagggaaagagattcaaatagcggatggctgacttatctctggcat
ctggacttttccgacatagagcaccagcttatgagggaaaagaaaagactgctaaggaat
ctgaagacccgccttgaatttgaagaaaatcatgtattttacgtttgtcctcagggttgt
gttcgccttctttttgacgaagcaacggaaacggaatttctctgcccaatgtgcggagaa
gacctggtttactatgacaactcccgttttgtgggagttctgaaaaagcgcgtagaagct
ttgagttccgcataa

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