Methanosarcina mazei S-6: MSMAS_0712
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Entry
MSMAS_0712 CDS
T04532
Name
(GenBank) DNA-directed RNA polymerase subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
mmj
Methanosarcina mazei S-6
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
MSMAS_0712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmj03021
]
MSMAS_0712
03019 Messenger RNA biogenesis [BR:
mmj03019
]
MSMAS_0712
Transcription machinery [BR:
mmj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
MSMAS_0712
RNA polymerase I system
MSMAS_0712
Messenger RNA biogenesis [BR:
mmj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
MSMAS_0712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
DZR
DZR_2
Prok-RING_4
zf-RING_5
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
AKB63908
UniProt:
A0A0E3RE45
LinkDB
All DBs
Position
complement(853430..853615)
Genome browser
AA seq
61 aa
AA seq
DB search
MPEKVCRHCLRVLEGQTCPVCGTSDLAEEWNGLVIILDTERSEIAKRLGVDIPDRFALKV
R
NT seq
186 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaaaagtctgtcgacactgcctgagggttctcgaagggcaaacatgtcctgtt
tgcggaacttcagaccttgcagaagaatggaatggacttgttattattcttgataccgaa
cgctcggaaatcgcaaaaagactcggggttgacatcccggatagatttgctttgaaggtg
cgctga
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