Methanosarcina mazei S-6: MSMAS_0794
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Entry
MSMAS_0794 CDS
T04532
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mmj
Methanosarcina mazei S-6
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmj03016
]
MSMAS_0794
Enzymes [BR:
mmj01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MSMAS_0794
Transfer RNA biogenesis [BR:
mmj03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MSMAS_0794
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
Motif
Other DBs
NCBI-ProteinID:
AKB63990
UniProt:
A0A0E3RDG3
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All DBs
Position
947817..948869
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AA seq
350 aa
AA seq
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MKTQLKGDRVLAGKEAVAELYKTGYFGRPKDDGLELSLVEAAYLQSRGKLDIELEGKLLG
FRAFFEQASLRQQNFELKYIVYKDLKERGYYVQPSSADFRVYPRGSHPGKSAAKIFVHVL
SERQPLSVKLLQESVASAENVHKQFILAVVDEESDLTFYEIKSASPKGEMPEPFPAVKAD
ATFLEDRVIAWDAEASGALYSRGFYGKMLDPERLQLSLVESLYLFSRGVIVVRDRKGKIF
SFEEFVEKASEIEGSFLRKYSAYKALRDSGHVVKTGFKFGTHFRVYRKVESIEKIPHSEY
LVNVIPADYEFRLPVMSGAVRLANSVRKRMLFAVEKGEEVEYLDIGRVKM
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacacaacttaaaggggacagggtcctcgcaggaaaggaagctgtagccgaactt
tacaaaacaggttatttcgggcgtccaaaagacgacgggcttgaactctcacttgtggag
gctgcgtaccttcagtcccgaggaaaactcgacatcgagcttgaaggaaaactgctaggt
ttcagggcattttttgaacaggcttctctgaggcagcagaatttcgagcttaagtacatc
gtttacaaggacctcaaagaaagaggatattatgtccagccctcatccgcggatttcagg
gtgtaccctcgaggcagccacccgggaaaaagcgcagcaaaaatttttgttcacgtcctt
tccgaaaggcagcccctttctgtaaaacttttgcaggaatccgtcgcttctgcagaaaat
gtccacaagcagttcatcctggctgttgtggacgaagaaagtgacctcaccttttacgaa
atcaaatccgcttctcccaaaggggaaatgcctgagcccttccctgcagtcaaagccgat
gcaactttccttgaagacagggtaatagcctgggatgcagaagcctccggggcactttat
tccaggggcttttacgggaaaatgcttgatcctgaaaggctgcagctttcgctggtcgag
tccctctaccttttttcgagaggggttatagtcgtccgggacaggaaaggaaaaatcttc
tcattcgaagagtttgttgaaaaagcttcggaaatcgaaggctctttcctgcgcaaatac
agcgcatataaagccctcagggactccgggcatgtggttaagacaggatttaagttcggg
acacatttcagagtctacaggaaagtcgaatcaatagaaaaaattccccactcagaatac
cttgtgaacgttatccctgcagattatgagttcaggcttccggtcatgtccggggctgta
aggcttgcaaacagcgtaagaaaaagaatgctttttgcggtcgagaaaggggaagaagtc
gagtaccttgatataggcagggtcaaaatgtaa
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