Methanosarcina mazei S-6: MSMAS_0819
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Entry
MSMAS_0819 CDS
T04532
Name
(GenBank) Uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mmj
Methanosarcina mazei S-6
Pathway
mmj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSMAS_0819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmj03400
]
MSMAS_0819
Enzymes [BR:
mmj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MSMAS_0819
DNA repair and recombination proteins [BR:
mmj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSMAS_0819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKB64015
UniProt:
A0A0E3RDI1
LinkDB
All DBs
Position
complement(975071..975664)
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AA seq
197 aa
AA seq
DB search
MVAEEENCGNREERVRKLVEAGYETVAREIIACIRCPLHESAIKRVIGKGSCNPKVFFIG
EAPGESENKSGIPFYGRAGKKLDQMVEYMGLSEEDWFVTNTVKCRPPGNRKPRVQEIECC
KPFLIAQITLLNPKLIILLGNTAEKSFCPERKLEWGVPVEHEGRTILKLYHPAALIYTAS
KIEVQRGFIDKNRELWQ
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggtagcagaggaagagaattgcggaaaccgtgaagaaagggttagaaaactggttgaa
gcagggtatgagactgtagcacgggagataatagcctgtataaggtgccctctccatgaa
agtgcaattaaaagagtgataggaaaaggatcctgcaatccgaaagttttctttatagga
gaagcccccggagaaagtgagaacaaatcaggaattcccttttacggcagggcgggaaaa
aagctggaccagatggttgagtatatggggctttcggaagaagactggttcgtaacaaac
acagttaaatgccgtcccccgggaaaccgaaagccaagggtacaggaaatagaatgctgc
aaacccttccttattgcccagataacccttcttaaccccaaactcataattctcctgggc
aacacagctgaaaagtcattttgcccggaaagaaaactggagtggggagtcccggtagaa
catgagggaaggacaatccttaaactttaccatcctgcagccctgatttacacagcttcg
aagatagaagtccagcgcggtttcattgataaaaacagggagctctggcagtaa
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