Methanosarcina mazei S-6: MSMAS_0856
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Entry
MSMAS_0856 CDS
T04532
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mmj
Methanosarcina mazei S-6
Pathway
mmj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSMAS_0856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmj03019
]
MSMAS_0856
03009 Ribosome biogenesis [BR:
mmj03009
]
MSMAS_0856
04131 Membrane trafficking [BR:
mmj04131
]
MSMAS_0856
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmj04147
]
MSMAS_0856
Messenger RNA biogenesis [BR:
mmj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSMAS_0856
Ribosome biogenesis [BR:
mmj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSMAS_0856
Membrane trafficking [BR:
mmj04131
]
SNARE
SNARE associated proteins
Others
MSMAS_0856
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSMAS_0856
Exosome [BR:
mmj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSMAS_0856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_5
AAA_16
AAA_22
AAA_14
TIP49
AAA_2
AAA_25
IstB_IS21
AAA_33
AAA_7
AAA_28
nSTAND3
RNA_helicase
Mg_chelatase
Sigma54_activat
AAA_18
Parvo_NS1
AAA_17
ATPase
NPHP3_N
DUF5906
Zeta_toxin
ABC_tran
AAA_24
PhoH
SLFN-g3_helicase
AAA_19
bpMoxR
DUF815
TsaE
NB-ARC
Vps4_C
ATPase_2
ResIII
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-ProteinID:
AKB64052
UniProt:
A0A0E3REH0
LinkDB
All DBs
Position
complement(1014239..1016617)
Genome browser
AA seq
792 aa
AA seq
DB search
MEEIQLKVEKAYPIDLGRGIIRLDPTALLKLQLSPGDIVEIRGKKKTTAKVWRADRQDWE
QGIVRIDNFIRQNAGVSIGEKVTIKKVEAPEAKKLILALPESMTQGGPELQFGEHANEII
KRHILKRPVFKGDIIPIINSMSQPMTESLTTSQVIPLVAVETDPANTIVLITETTNIELR
KKPVQGYEKATRGVTTYEDIGGLGDEIMRVREMIEMPMKHPELFAHLNIEPPKGVILYGP
PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQEAPSVIFIDEI
DSIAPKRENVTGEVERRVVAQLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDRE
IHIGVPDTKDRYEILQIHTRGMPIEKDEESVTGEPAPEVEIGALDEFEVETGTEIEVDEA
AMEREKKEKTNLYLMSLAERTQGFVGADLLALVQEAAMRCLRENLPDLDLEIDTIPPERL
EKIVVTKKNFEDALMEAEPSALREIFVEMPSVSWGDVGGLDEAKHSIIEAVEWPIKNPEK
FVKMGIKAPKGILLYGPPGTGKTLIAQAVAKESNANFISVKGPEMFSKWLGESEKAIRET
FKKARQVSPCVVFFDEIDSIAGMQGMESTDSRTSERVLNQLLTEMDGLETLKDVVIIAAT
NRPNLLDPAILRPGRFDRLVYVGAPDRKGRLRIFKIHTQNTPLAEDVNLENLADTTEGYV
GADIEAVCREAVMFALRENFDIEAIEMRHFREALKKVKPTINENIAQFYEKIEEQFKGGQ
RPVETAGLVGYR
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatacagttgaaggttgaaaaggcatatcctattgaccttggaagaggaatt
atccggcttgaccctacagctctgctgaaacttcagctctctcccggtgacattgtggag
ataagggggaagaaaaagaccactgcaaaggtatggagagcggaccggcaggactgggaa
cagggaattgtgcgcattgataatttcatccggcaaaatgccggggtctccataggggag
aaggtgacaattaaaaaggttgaagccccggaagcaaaaaaattgatcctggcgcttccg
gaaagcatgacacagggagggcccgaacttcagtttggagaacatgcaaatgagatcata
aaacggcatatcctgaaaagacctgtgttcaagggggacataattccaataataaattca
atgtctcagccaatgacagagtccctgacaacaagccaggtaatccccctggttgctgtc
gagactgaccctgcaaatacaattgtcctgattaccgaaacaacaaacattgaactccgg
aaaaaaccggtacagggctacgaaaaggcaacaagaggcgtcaccacctatgaagatata
gggggcctgggtgacgagatcatgcgtgtccgtgaaatgatagagatgcccatgaagcac
cctgaactttttgcccaccttaacattgagcctccgaaaggagtcatcctctacggccca
ccgggaaccggaaagaccctgattgcaaaagccgtggcaaacgagtccggagcaagtttc
cattacattgccgggcccgagattgtaggaaagttctatggggaaagtgaagaaaggctg
aggaagatcttcgaggaggctacccaggaagccccttcagtcatcttcatcgatgaaatc
gactccattgcccccaagagggaaaacgtgacaggggaagtggaaaggcgtgtggttgcc
cagctcctgaccctgcttgacgggatggaggaaagaggacaggttgtggttataggggct
accaaccgtgtggacgcaatagacccagcactcaggagacctggccgctttgacagggaa
atccatataggagtgccggataccaaagacaggtatgagattctgcagatccatacaagg
ggcatgccgattgaaaaagatgaagagtccgtgacaggtgagcctgcgccggaagtcgaa
attggagccctggatgaattcgaggttgaaacagggactgagatagaagtcgatgaagct
gccatggagagggaaaagaaagagaagacaaacctgtatctcatgtccctggctgagagg
acgcagggatttgtgggtgcggaccttctggctcttgtgcaggaagcagcaatgaggtgc
ctaagggaaaacctgcctgacctcgacctggaaattgacacaatcccacctgaaaggctg
gagaagattgttgtaaccaaaaagaacttcgaagatgcactgatggaagccgagccttca
gccctgagagagatctttgttgagatgccttctgtcagctggggcgatgttggaggtctt
gatgaagcaaagcattctatcatcgaagctgttgagtggcctattaaaaacccggaaaag
tttgtcaagatgggaataaaagctcctaaaggaatcctgctttacggacctccgggaaca
ggaaagaccctgatagcccaggctgttgcaaaagagtcaaatgccaatttcataagcgtt
aaagggccggagatgttttcaaagtggcttggagaatcggaaaaagcaattcgtgaaacc
ttcaagaaagcgaggcaggtctctccctgtgttgtcttctttgatgagatcgactctatt
gccggtatgcagggtatggaatccacggacagccggacttctgaaagggtactcaaccag
ctgctcaccgaaatggacgggcttgagacactcaaggatgtggtaattattgccgcaact
aaccgccctaacctgcttgaccccgcaatcctgcgtcctggccgctttgacaggcttgtt
tatgtgggggcgccggacaggaaaggcaggctgaggatcttcaaaatccatacgcagaat
acacctcttgcagaggacgtgaaccttgagaaccttgccgatacgacagaaggatatgtg
ggtgcggatatagaagcggtatgcagagaggctgtaatgtttgctctcagagaaaacttc
gatattgaagcgattgagatgaggcacttcagagaagcccttaagaaagttaagcccaca
attaacgagaacattgcccagttctatgagaagatagaggagcagtttaaaggaggccag
agaccggtcgagacagccggattggtgggatacaggtaa
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