Methanosarcina mazei S-6: MSMAS_0878
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Entry
MSMAS_0878 CDS
T04532
Name
(GenBank) Putative ski2-type helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
mmj
Methanosarcina mazei S-6
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmj03400
]
MSMAS_0878
Enzymes [BR:
mmj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSMAS_0878
DNA repair and recombination proteins [BR:
mmj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MSMAS_0878
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
Helicase_C
ResIII
HHH_5
DEXQc_Suv3
HTH_61
HHH_2
DNA_pol_lambd_f
Cdd1
Motif
Other DBs
NCBI-ProteinID:
AKB64074
UniProt:
A0A0E3RIP1
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All DBs
Position
1043731..1045923
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AA seq
730 aa
AA seq
DB search
MKIESLDLPDEIKRFYENSGILELYPPQAEAVEKGLLEGKNLLAAIPTASGKTLLAELAM
LKSVLNGGKALYIVPLRALASEKFRRFQEFSVLGMRVGISTGDYDRRDEGLGINDIIVAT
SEKTDSLLRNETAWMQEISVVVADEVHLIDSPDRGPTLEITLSKLRRMNPSCQVLALSAT
VGNADELAAWLDAELVLSEWRPTDLMEGVFYNGIFYCKDKEKPVGQPTKDEAVNLVLDTI
KEGGQCLVFESSRKNCMGFAKKAVSAVKKTLSNEDRETLAGIADEIIENSETDVSSVLAT
CVRSGTAFHHAGLTTPLRELVENGFREGRIKIISSTPTLAAGLNLPARRVIIRSYRRYSS
DSGMQPIPVLEYKQMAGRAGRPRLDPYGEAVLLAKSYEEFVFLFEKYIEAGAEDIWSKLG
TENALRTHILSTISNGFARTREELMDFLEATFFAFQYSNFGLSAVVDECLDFLRREGMLE
KDPDALVSTVFGKLVSRLYIDPLSAALIAKGLREAGTLTELTLLHLICSTPDMRLMYMRS
QDYQEVNDYVMAHAGEFSKVPNPFNIAEYEWFLGEVKTSLLLMDWIHEKPENEICLKFGI
GEGDIHATADIAEWIMHVTAQLAGLLDLKGAKEASELEKRIRYGAAPELMDLLDIRSVGR
VRARKLYEAGFKSTAELAAASPEHIAVLVGPKITERIFKQIGRREAVSEFSDIEPLEKGS
SDGQRTISDY
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaaagcctcgacctgcccgatgaaataaagcgcttttacgaaaactccggg
attcttgaactttatccgccacaggcagaagctgttgagaaaggcctgcttgaaggaaaa
aacctgcttgctgcaattcctacggcttcgggaaagactcttcttgccgagcttgcgatg
ttgaagtctgtgcttaatggaggaaaggcactctatatcgtgcccctgagagctcttgct
tccgagaaattcaggcggtttcaggaattttccgtactgggcatgagggtcgggatttca
acaggagactacgacaggcgagacgaagggctcggcataaatgatattattgttgcaacc
tctgaaaaaacagattccctgctcaggaacgagactgcctggatgcaggagatctctgtt
gttgtggcagatgaagttcaccttattgattctccagacaggggtccgacgcttgaaatc
accctttcaaagctcaggcgaatgaacccttcctgtcaggtccttgcactttcggcaaca
gtaggaaatgccgatgagcttgcagcctggcttgatgccgaacttgtattaagcgagtgg
aggcccaccgaccttatggaaggggtgttttataacgggattttttactgcaaggataag
gagaagcctgttgggcagccaacaaaagatgaggcagtaaacctggttctcgatactata
aaggaaggaggacagtgccttgttttcgagagcagcaggaagaactgcatgggttttgca
aaaaaagcagtttctgcagtaaaaaagactctttctaatgaagaccgtgaaactcttgca
ggcattgctgacgagatcattgaaaacagtgaaaccgatgtttcatcagttcttgccacc
tgtgtccgttcagggacagcattccaccacgcaggccttacaacgcctttgagggagctt
gtagaaaacggctttcgtgaagggcgtataaaaattatttcaagcactcctacccttgca
gcagggttgaaccttcctgccaggcgtgtgataataaggagttaccggcgttactcttca
gattcgggcatgcagccaatcccggtacttgaatacaagcagatggcaggaagggcaggg
aggccgaggcttgacccttacggagaagctgtcctgcttgcaaagtcttacgaggagttt
gtcttccttttcgaaaaatacatcgaagccggagctgaagatatatggtccaagctgggt
acggaaaatgccctcaggacgcatatactttctacgatctcgaacgggtttgcccggaca
agggaagaactcatggatttcctcgaggcaacatttttcgctttccagtactcaaacttc
gggctctccgcggttgtggacgaatgcctggactttttgaggcgggaaggtatgcttgaa
aaagaccccgatgcccttgtttccacggttttcggaaaactcgtatcaaggctctacatc
gaccctctctctgcagctcttattgcaaagggcttgagggaagcaggtacccttaccgag
cttacccttctgcacctgatatgcagcactccggatatgcgtcttatgtatatgcggagc
caggactaccaggaagtcaacgactacgtaatggctcacgcaggcgagttttcaaaggtt
ccgaatcccttcaatatcgccgagtacgagtggttccttggtgaggtaaagacctctctc
cttctgatggactggatacatgagaagcctgaaaacgagatctgtctgaagttcgggata
ggggaaggtgatatccatgcaactgcagatattgccgaatggataatgcatgttacagcc
cagcttgcaggacttctcgaccttaaaggtgcaaaagaagcctcagaactggaaaagagg
atcaggtatggagcagccccggaacttatggacctgcttgatatcagaagtgtggggcgc
gtgagagcaagaaaactttatgaggcaggctttaagtccacagctgaactcgcagcagct
tctcctgaacatatagccgtacttgtaggaccaaagattactgaaaggattttcaagcag
atcggacgtagagaagcggtatctgaattttctgatattgagcctctggaaaaaggttct
tccgatgggcagaggacaattagtgattattga
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