Methanosarcina mazei S-6: MSMAS_1109
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Entry
MSMAS_1109 CDS
T04532
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mmj
Methanosarcina mazei S-6
Pathway
mmj03420
Nucleotide excision repair
mmj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSMAS_1109
03430 Mismatch repair
MSMAS_1109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmj03400
]
MSMAS_1109
Enzymes [BR:
mmj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSMAS_1109
DNA repair and recombination proteins [BR:
mmj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSMAS_1109
MMR (mismatch excision repair)
Other MMR factors
MSMAS_1109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
Cas_Cas4
UvrD_C_2
Viral_helicase1
DUF2800
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKB64305
UniProt:
A0A0E3RJB6
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Position
complement(1323359..1326085)
Genome browser
AA seq
908 aa
AA seq
DB search
MGDKRFLELIIKEPKELSDSQKKAVLSDRRHIRIIAGAGAGKTETLTRKIVCLLLYENVK
PASIVAFTFTEKAAQGMKSRVYDRVRQLGGEEICAKLGEMYIGTIHGYCSFLLENHFKFG
DYGVLDENQETAFLMRVGWELGFGKNGNYTQNCRTFLKNLNVVYGELIPENNLKKKAPEF
YKCFKKYEEILDSHKRLTFNRMINLALTNLQEKQNVLSDVKYLIVDEYQDINRAQEKLIQ
LIGLNSEIFIVGDPRQTIYQWRGSDEKCFEDFAVKHIDAETISINENRRSGRQIIEVSNQ
FSDYFEDEYDHLDPVRKEEGAVYIAKLSDNIHEAKWIADQIEKHVDAGKCSYGDIGILLR
SVNTSAPPFIDIFRERNIPFIVGGKVGLFRRPEIQTMGKLFAWLYDKGFWYESQWDRENK
EEGEELLYSALESWNDGVPSCKLHSEVIKKLENWKKNTLDSKYESFTEVYHELLVLLNYL
NLDSEDPNHAVIMANLGRFSSLLTDFESANMLGGRQRNWERDLKNLCWYMNSYASGSYEE
QPGDDIRGVDAVQLMTVHQAKGLEWPLVFVPAMNARRFPSSMAGREQTWMIPRNMFDAEK
YEGDIESEKKLFYVALTRAKDVLVVSHFGTLNGRNSGESTFISEGLRDSKTTKLSAKDEL
PLHDLTSSKISDEILTYTPSEIILYRKCPYFYRLNQIWGYEPGFKERIGYGNTLHFCLQQ
AADLIKNEGYSPISAISTAVDENFYMPFVNKIQGEKIKEAAKRKLISFVKKHETDMHNIQ
EVEARIEFPLQKATITGKIDVIIHDGDQLEVRDYKTSDSVITEAESAMQIQMYSIGMKIL
GENVTKGSVAYLSDAKVAYVEVDDSRLEETKKQVERHIEGIKNRSFKPCTGEFCNKCELT
KICRWKKR
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataaaagatttctggaattgataattaaagaaccgaaagaactatctgatagt
cagaaaaaagccgttctatcagacagaagacatatcaggattattgctggagctggcgcc
gggaaaactgaaacactcacaagaaaaattgtgtgtttgcttctttacgaaaatgttaaa
ccagcatctattgttgctttcacatttacggaaaaagcagcgcaggggatgaaaagtcga
gtttatgatcgtgtccgccaacttggtggtgaagagatatgtgccaaactgggggaaatg
tacattggcacaatacatggttactgctcttttttactagagaaccattttaagtttgga
gactatggagttcttgacgaaaatcaagaaactgcttttctaatgcgtgtgggatgggag
cttgggtttggtaaaaatggaaattacacccagaactgccggacatttcttaaaaatctt
aacgtggtatatggggagctaataccagaaaacaatctaaaaaagaaagctccagaattc
tataagtgttttaaaaaatatgaagaaatcttagattcccataagaggttgacatttaat
agaatgatcaatctagccctaacaaatttacaagagaagcaaaacgtactctcagatgta
aaatatctgattgttgacgaataccaggatataaatagggctcaggaaaaacttatacag
ttaataggactgaattccgagatttttattgtgggagatcccaggcaaactatttaccag
tggcggggatcagatgagaagtgttttgaagattttgcagtaaagcacatagatgccgaa
actatttctattaatgaaaatagaaggagtggcaggcaaattatagaagtttcaaatcag
ttctcagattattttgaagatgaatatgaccatcttgatcctgtgagaaaagaagagggt
gcagtatatattgcaaaactttcggataacatccatgaagcaaaatggattgcggatcag
atagagaaacatgtagatgctggaaagtgttcatatggtgatattggaatactacttcgc
agtgtaaatacatcagcgcctccattcattgatatattcagggaaagaaacatacctttt
attgtaggaggtaaagttggtcttttccgcaggcctgaaattcaaactatgggcaaactt
ttcgcctggctttacgataaaggattctggtacgaaagccaatgggatcgagaaaataaa
gaggaaggagaagagctcctctattctgcacttgaaagctggaatgatggagttcctagc
tgtaaattacatagcgaagtaattaaaaagctcgaaaactggaaaaaaaatacgcttgat
tcaaaatacgaaagctttacagaagtgtaccatgaacttctcgtcctgttaaattacctt
aaccttgattcagaagatccaaatcatgctgtgataatggcaaacttgggaaggtttagc
tctcttttaactgattttgaatctgcaaatatgcttggtggcaggcagagaaactgggaa
agagatttgaagaatctctgctggtatatgaatagttatgcatcaggctcttatgaagag
cagccgggagacgacatccgaggagtagatgctgttcagttgatgacagtacaccaagca
aagggacttgaatggccactggtctttgtcccagctatgaacgctaggcgttttccatcg
agtatggcaggaagagagcaaacatggatgatcccaaggaatatgtttgatgccgagaaa
tatgagggagatatagagagtgaaaagaaacttttctatgttgctctcacgagggcaaag
gatgtgcttgttgttagccactttggaacgctaaacggcagaaactcaggagaaagcact
tttatcagtgaagggcttcgggattcaaagactacgaaattatctgcaaaagacgaacta
cctttgcatgacctaacaagttccaaaatttcagatgagatacttacgtacaccccctcc
gagattatcctataccggaaatgcccttacttttacagattaaaccaaatctggggttac
gagccgggattcaaagagagaatcggttatggaaatactctacatttctgccttcagcaa
gcagcagatctgattaaaaatgaagggtacagccccataagtgcaatttcaacagcagtc
gatgagaatttctatatgccctttgtaaataagatacagggagaaaaaataaaggaagca
gctaagagaaagctcataagttttgtgaaaaagcatgaaacggatatgcataatatacag
gaagttgaagcaaggatagagtttccactccaaaaagccacaattactggaaaaattgac
gttataattcatgatggagatcagctggaagttcgtgactataaaacatcagatagcgtt
atcacagaagctgaatctgccatgcaaatccagatgtactcaataggaatgaaaattctt
ggggaaaatgtgactaagggttctgtagcatatctctcagacgcaaaagtcgcatatgtg
gaagtagatgattccagacttgaagaaacaaaaaaacaagtagaaagacatatagaggga
ataaaaaaccgtagcttcaaaccatgtacaggggaattttgtaataagtgtgaacttaca
aagatatgtagatggaaaaaaagatga
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