Methanosarcina mazei S-6: MSMAS_1991
Help
Entry
MSMAS_1991 CDS
T04532
Name
(GenBank) Phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmj
Methanosarcina mazei S-6
Pathway
mmj03410
Base excision repair
mmj03430
Mismatch repair
mmj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSMAS_1991
03430 Mismatch repair
MSMAS_1991
03440 Homologous recombination
MSMAS_1991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmj03400
]
MSMAS_1991
DNA repair and recombination proteins [BR:
mmj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MSMAS_1991
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MSMAS_1991
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MSMAS_1991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AKB65187
UniProt:
A0A0E3RKL2
LinkDB
All DBs
Position
2500484..2501473
Genome browser
AA seq
329 aa
AA seq
DB search
MTDAQNQLKAKTLILTHGDSDGICSGALAKSAFPDAYVYFTSPVSLLEKLNLIEYVETLI
ICDIAIDERYCTELQSALGKFAEECNLYYIDHHPLPERCSKEEWFYHETEVCASELTYRV
FEDLLSSEMKRVAIYGAIGDFSDNTPCVKDWVKDWDKRSLYFQAGTLIQAILHKGKDYEF
KRTLLEPLSKNIIPSNIPDLLELAREAAINEEKIRFCVKKSVKALKNSAYVVNTNNSISK
AAIYAASYGRREVGIAAEYREKKGAYDLSIRSRGEVDLNRILRSVAPSFGGSGGGHPVAA
GARIPEGSLESFLRAFDKKIGEAKEVKQK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgctcagaaccagctcaaagcaaaaaccctgatccttactcatggggactct
gacgggatatgttcgggagcacttgcaaaaagcgcttttcctgatgcatatgtatacttt
acaagccctgtgagccttcttgaaaaattaaatcttatagaatatgttgaaactctcatt
atctgcgatattgctattgatgaaaggtactgcactgaactccaatctgcacttgggaag
tttgcggaagaatgtaacctttattacattgaccaccacccacttccggaaaggtgcagt
aaagaagaatggttttaccatgaaacagaagtatgcgcttcagagctgacttatagagtt
tttgaagaccttctgagctcagagatgaaaagagttgcaatttacggggctataggggac
ttcagtgataacaccccctgtgtaaaggactgggtgaaagactgggacaaaagaagcctc
tatttccaggcagggaccctgatccaggcaatactccataagggaaaagattatgaattc
aaaaggactctgcttgaacccctttcaaaaaatataatcccttcaaatatcccggatctg
ctcgaactcgcaagagaagctgcaattaacgaagaaaaaatccggttctgcgtaaaaaaa
agtgttaaagccctcaaaaacagcgcgtatgttgtaaatacgaataactccatttcaaaa
gcagcaatctatgcagcttcctacggccggagggaggttggaattgcagcggaatacagg
gagaaaaagggagcgtatgacctgagtatacgttcccgcggagaagtagacctgaaccga
atcctccgctcagttgctcccagttttggagggagcggaggcgggcaccctgttgcggca
ggagcacgaataccggaaggttctctggaaagttttctccgggctttcgataaaaagatc
ggagaagcaaaagaggttaaacaaaaatga
DBGET
integrated database retrieval system