Methanosarcina mazei S-6: MSMAS_2424
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Entry
MSMAS_2424 CDS
T04532
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mmj
Methanosarcina mazei S-6
Pathway
mmj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSMAS_2424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmj03021
]
MSMAS_2424
Enzymes [BR:
mmj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSMAS_2424
Transcription machinery [BR:
mmj03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSMAS_2424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
AKB65620
UniProt:
A0A0E3RHZ1
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All DBs
Position
3029984..3032626
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AA seq
880 aa
AA seq
DB search
MANVPPIPKRISSIKFGLMSPKEIRKMSATPIITADTYDDDGFPIDMGLMDTKLGVIDPG
LRCKTCSGRAGECPGHFGHIELVAPVVHVGFNKVIRKLLRATCRKCSKILLEPAQKQQFL
DQLTAVEEIGHMPDDLINEVYKEASKVKNCPYCNEEQLEIKFEKPSEYLENGEKLTPTEI
RDRFENIPDEDIRVVGMDPKNARPEWMILTVLPVPPVTVRPSITLESGQRSEDDLTHKLV
DIIRINQRFQENREAGAPQLIIEDLWELLQYHVTTFFDNSVSGIPPARHRSGRPLKTLSQ
RLKGKEGRFRGSLSGKRVNFSARTVISPDPNLSINEVGVPMPIAKILTMPAVVTPRNIEQ
LKVYVRNGEDIHPGANYVFRSDGRRIKVTNMNKEDLAEKLEFGWTVERQLKDGDTVLFNR
QPSLHKMSIMAHSVKVLPNKTFRLNPAVCPPYNADFDGDEMNMHALQTEESRAEAKILMQ
VQENILSPRFGGPIIGGIHDHISGLFLLTRFENRISSFDAYDLLRKSSARSLPEPAGHDE
YGKPYWTGKQIFSQILPEGLNAEFSAQVCSHCDTCKKEECPNDAYVVIRDGKLITGTVDE
AAIGAFKGKIQDRIIKEIGPEAGARFVDDMTKLAIRAIMRTGLSFGIADEDIPKEARIQI
NEVLTEAEDAVQNLIKSYINKELDPLPGRTLDETIEMSIMQKLGKARDKTGNIADSHMGL
ENSAVIMARSGARGSILNLTQMAACVGQQAVRGERIRRGYAGRTLPHFLEGDLGSDAHGF
VKASYKSGLNPTEYFFHAIGGREGLVDTAVRTSQSGYLQRRLVNALQDLEVQYDLTVRDT
RGVLVQFKYGEDGINPTKSDFSKPDTIHRIVRSVVNKEVA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgtacctccaattcctaaaagaatttcttctatcaaattcggcttaatgtcc
ccaaaagaaatccgtaagatgagtgcaacccccattatcacggctgacacttatgatgac
gacgggtttccaattgacatggggcttatggacacaaaactcggggttattgaccccggg
cttcgctgcaagacctgctctggcagggcgggtgagtgtcctggacacttcgggcacatt
gaacttgttgcccctgttgtccatgtaggttttaacaaagtaatcagaaaacttctcagg
gcaacctgcaggaaatgcagcaagatccttctggaaccggcacagaagcagcagtttctg
gaccagcttactgcagtcgaagagatcgggcacatgcctgatgacctgattaatgaagta
tataaagaagccagcaaggtgaaaaactgcccttactgcaatgaagaacaacttgaaatc
aagttcgaaaagcccagcgagtacctggaaaacggagagaagctgacccctaccgagata
agggaccgctttgaaaacatccctgacgaagatataagggttgtagggatggacccgaaa
aacgcaaggcctgaatggatgatccttacagtcctgccggtaccccctgttaccgtacgt
ccttcaattacactggaatccgggcagcgcagtgaagacgacctgacccacaagctggta
gacattatcaggatcaaccagcggttccaggaaaacagggaagcaggagctccacagctt
atcattgaggacctctgggaacttctccagtatcacgttaccacattctttgacaactcg
gtttcaggaattccgcctgcaaggcacaggtctggaaggcctctcaagaccctctcccag
cgtttaaaaggtaaagaagggaggttcaggggaagcctgtcaggtaagcgtgttaacttc
tcagcccgtactgttatctcccctgacccgaacctcagcataaacgaagtcggtgtgccc
atgcccattgcaaagatcctgacaatgcctgcagtggtgaccccaaggaacatcgaacag
ctcaaggtctatgtaaggaatggtgaagatatccacccgggagcaaactacgttttcagg
tcagacggcaggcgcataaaagtaaccaatatgaataaggaagacctcgccgagaagctg
gaattcggctggactgtggagcgccagttaaaagacggcgatactgtgcttttcaacagg
cagccgtctcttcacaaaatgagtatcatggcacactcagtaaaggtgctgccgaacaaa
actttcaggctgaaccctgctgtctgtcctccgtataacgctgactttgacggggacgaa
atgaacatgcacgccctccagacagaagagtcaagggctgaggcaaagatcctcatgcag
gtccaggagaacatcctttccccgcgtttcggaggtcccattatcggagggatccacgac
cacatttcgggtcttttcctgctgacccgttttgaaaacagaatttccagttttgatgct
tacgaccttctcaggaagagcagcgcacgcagcctgcctgaacctgcagggcatgatgag
tacggaaaaccgtactggacaggaaaacagatcttcagccagatcctgcctgaaggtctc
aatgcagagttctcagctcaggtctgctcacactgcgatacctgcaagaaagaagaatgc
ccgaacgatgcctatgtggtaatccgggatggaaaactcattacaggtaccgtagacgaa
gcggcaataggggctttcaaaggaaagattcaggaccgcatcatcaaggaaattggcccc
gaagcaggagcccgctttgtggatgacatgactaaactggcaatcagggcaatcatgcgc
acgggactgagtttcggaattgctgatgaagatatcccgaaagaagccaggatccagatc
aatgaggtcctcacagaggctgaagatgccgtgcagaaccttatcaagtcatacataaat
aaagagcttgaccccctcccgggaaggacccttgacgaaacaattgaaatgagtatcatg
cagaagctgggtaaagccagagacaagactggtaacatagcagacagccacatgggtctt
gaaaactctgcagttattatggctcgttcgggagccagaggttctatcctcaaccttact
cagatggcagcctgtgtcggccagcaggcagtgcgtggtgagcgcatccgcagagggtat
gcaggcagaaccctgccccacttccttgaaggtgacctgggatcagatgcccacggattc
gttaaggcaagctacaagagcgggctcaacccgaccgagtatttcttccacgccatcggt
ggtagagaaggtcttgtggacactgcggtcaggacatcgcagtcaggttacctgcagaga
agacttgtcaatgcccttcaggaccttgaggtccagtacgaccttacagtaagggataca
agaggtgtgcttgtacagttcaagtacggggaagatggaattaacccgacaaagagtgat
ttcagcaaacccgacactatccacaggattgtccgttccgtagtaaacaaggaggtggca
tga
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