Methanosarcina mazei S-6: MSMAS_2530
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Entry
MSMAS_2530 CDS
T04532
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mmj
Methanosarcina mazei S-6
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmj03016
]
MSMAS_2530
Enzymes [BR:
mmj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSMAS_2530
Transfer RNA biogenesis [BR:
mmj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSMAS_2530
Prokaryotic type
MSMAS_2530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AKB65726
UniProt:
A0A0E3LUR4
LinkDB
All DBs
Position
complement(3165774..3166790)
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AA seq
338 aa
AA seq
DB search
MSSAGKLPSEVERTLVRKSGAWTNPAYGCPPEKRPIHEYIEKGVVNIDKPRGPTSHEVAA
WVKAILGVHTAGHAGSLDPKVTGLLPTLLGKATLAVPALRLSGKEYICHLKLHRAMPQKL
VRQVCEEFTGPIYQMPPIKSAVKRVIRVRTIYYLEVLEIEGTSVLFRVGCEAGTYIRKLC
HDIGLALGCGGHMQGLRRTKAGPFTEKTLITLHELKDAYVFWKEDGDESELRRVIRPMES
AVSHLPKIILRDSAVDAICSGASLAVPGITGLDSNLAEGELTGLFTLKGELVALAKAKMT
TEEILKASAGIAASPIRVLMEAGTYPRGWTKKEEKVQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgccggcaaactgccatcagaagttgaaagaacccttgtccggaagtccggc
gcctggacaaatccagcctacggctgtcctccggaaaagcgccccatccatgaatatatt
gagaagggagttgtgaatattgacaagcccagaggacctacaagccatgaagttgcagcc
tgggtaaaagccatccttggcgtacacacggcaggacacgcaggctctcttgaccctaag
gttacaggtcttctgccaacactgctcggaaaagctacccttgccgtgccagccctgcgc
ctctcgggaaaagagtacatctgccatttgaagcttcacagggctatgccccagaagctg
gtccgccaggtatgtgaggagtttactggccctatttaccagatgccccctatcaagtcc
gctgttaagcgcgttataagggtaaggacaatctactatctggaagtgcttgagatcgag
ggtacgtctgtgctcttccgtgttgggtgtgaagcagggacttatatccggaaactctgc
cacgatatagggctcgctctgggctgcggcggacatatgcaggggctccgcaggaccaaa
gcaggtccgtttacggaaaagacgcttattaccctccacgaactgaaggatgcttatgtt
ttctggaaggaagacggggacgagtctgaattgagaagggttataaggccgatggaatcc
gccgtatcccacctccccaaaattatcctgcgggacagtgcagtggatgctatctgttca
ggagcttccctggcagtccctggtattacaggtctcgactctaatctggctgaaggagaa
ctcacagggctatttactttaaaaggggaacttgttgctcttgcaaaggctaaaatgacc
actgaggagatcctcaaagcctctgcgggtattgcagcttctcccatccgtgtacttatg
gaagcaggaacttatccaagaggctggactaaaaaagaagaaaaggtacagttctga
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