Methanosarcina mazei S-6: MSMAS_3114
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Entry
MSMAS_3114 CDS
T04532
Name
(GenBank) Transcriptional regulator, TrmB family
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
mmj
Methanosarcina mazei S-6
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmj03000
]
MSMAS_3114
Transcription factors [BR:
mmj03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSMAS_3114
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_IclR
HTH_27
HTH_34
GntR
HTH_46
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AKB66310
UniProt:
A0A0E3RKW3
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Position
complement(3855538..3856317)
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AA seq
259 aa
AA seq
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MFLQHNNQLICNLEKMGLTENEAKAYVGLVSLGEATAREVHELTNVPRAKIYEVLKVLAK
RGYLEVRQGSPTYFRAVDPKQVIGKIKDEFINCAIETLDQLNELSYELPRTSPVWCIQSE
WGIKNRIREILNGVKEELIVFSSSPRFFQEFEAELKKLEKTCQLTFIISEPEKFESFPFE
FRETTKEFREFLNNIVIDGIRYDEEFFMIADGKESIGVHSAGDKREAVVIKLPVVCYLQK
MIYDRVLEPSFVKKNRKSA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtttttacagcacaataatcaattaatttgcaatctggagaagatggggctaactgaa
aacgaggcaaaagcctatgtagggcttgtcagtcttggagaggctacggcacgagaagtt
catgaacttacaaacgtgccgagagccaagatatatgaagtccttaaagtactcgcaaaa
aggggttatctggaagtccgacagggctctccgacttacttccgtgcagttgatcccaag
caggtaataggcaagataaaagacgaattcattaactgcgcaatcgaaactcttgaccag
ctcaatgaactcagttatgagcttcccaggacatctcctgtctggtgcatccagagcgaa
tgggggattaaaaacaggatccgtgaaattctcaatggggtaaaagaagagctgattgtc
ttctcatccagccccaggttctttcaggaatttgaagctgaactgaaaaaactggaaaaa
acctgccagttaacctttattataagtgaacctgaaaagtttgaatcgtttccatttgag
ttccgggaaaccactaaagaatttcgcgagttcctgaacaatatcgtaattgatggaatc
aggtatgacgaagaattttttatgatagctgacggaaaggaatcaataggggtgcacagc
gcaggagacaaaagagaagcggttgtaatcaaactgccagttgtttgttacctgcaaaag
atgatttatgatagggttctcgagccaagcttcgttaaaaaaaatcgtaaatctgcttga
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