KEGG   Methanosarcina mazei S-6: MSMAS_3265
Entry
MSMAS_3265        CDS       T04532                                 
Name
(GenBank) DNA polymerase sliding clamp protein PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
mmj  Methanosarcina mazei S-6
Pathway
mmj03030  DNA replication
mmj03410  Base excision repair
mmj03420  Nucleotide excision repair
mmj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSMAS_3265
   03410 Base excision repair
    MSMAS_3265
   03420 Nucleotide excision repair
    MSMAS_3265
   03430 Mismatch repair
    MSMAS_3265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmj03032]
    MSMAS_3265
   03400 DNA repair and recombination proteins [BR:mmj03400]
    MSMAS_3265
DNA replication proteins [BR:mmj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSMAS_3265
DNA repair and recombination proteins [BR:mmj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSMAS_3265
   MMR (mismatch excision repair)
    Other MMR factors
     MSMAS_3265
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MSMAS_3265
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1
Other DBs
NCBI-ProteinID: AKB66461
LinkDB
Position
4030322..4031059
AA seq 245 aa
MFKAAINAELLKDAIASLAVIVDEVRFKIKPEGISVKAVDPANVAMGIFELGSSAFEEYS
ADECEIGIDLNKITDLLGIADRNDTVRMELDEGSNKLLIDVGGLSYTLSLLDPSTIRAEP
RVPQLELPAKVVLNGADLRRAVKAAEKISDHMLMGVSGDTFYMEAKGDTDQVRLEMGRDQ
LIDLKAGEACSLFSLDYLTDIVKPTNKVNEVTLSLGRDFPILIDFEIANGAGRISYLLAP
RIESD
NT seq 738 nt   +upstreamnt  +downstreamnt
atgttcaaggcagcaattaatgcagagcttctgaaagacgcaattgcctcactggctgta
attgtagacgaggtcagattcaaaattaaacccgaaggtatttcggtaaaggcggttgat
cccgccaacgttgcaatggggatttttgagcttgggtcatcagcttttgaggaatatagt
gctgatgagtgtgaaatagggatcgatctgaataagattaccgacctcctgggaattgcg
gacaggaacgatacagtacgtatggagcttgatgaaggtagcaataagctcctgattgat
gttggaggattatcatatactctttctcttctggacccttcaacaatccgtgcagagccc
agagttcctcagctcgaacttcctgccaaagttgtcctgaacggtgcagacctcaggcgt
gccgtaaaagccgcagaaaaaataagcgaccacatgcttatgggagtctctggcgatact
ttttatatggaagcaaagggcgatacagatcaggtccgcctggaaatgggtagagaccag
ttaatcgaccttaaagcaggtgaagcctgttccctcttctccctggactaccttacagat
atagtaaaacccacaaacaaggtaaatgaggtcactctctcccttggaagggatttcccc
atcctgattgatttcgagattgcaaacggtgcgggcagaatctcttacctgctggctccg
agaatcgaatcggactaa

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