Methanosarcina mazei S-6: MSMAS_3318
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Entry
MSMAS_3318 CDS
T04532
Name
(GenBank) Archaeal DNA polymerase II small subunit
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
mmj
Methanosarcina mazei S-6
Pathway
mmj03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSMAS_3318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmj03032
]
MSMAS_3318
Enzymes [BR:
mmj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSMAS_3318
DNA replication proteins [BR:
mmj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
MSMAS_3318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AKB66514
UniProt:
A0A0E3RJT0
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All DBs
Position
complement(4103068..4105011)
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AA seq
647 aa
AA seq
DB search
MNEIDIVRAVTEEGYQISPSAVELIKSSISPESLLKYVLSTIDDCIFVIESEHIDLKGFE
ASKKAFDASESPSLTLSRAQSGNMSAGNMSSGNKPSDVISSPSSEPVNSDRLNNSEKVKT
PGSLSDSLEEEGSTLSVETEVVSGFDIPHNNPVTDSDISFSQEPASDIAAHGSLASTVYP
SSGGIEKQVSSFFGEAGSKSFSAFKSASRADSFFSNEGALSSSSRAEGVRHISGLNPITV
LSDITGHSTCVGEYVQFVQYFRDRYSKLSEILRGRMNARPIESLKKRSFRRGSDGGNEEL
SIIGIVSDISSTNNGHKILSLEDSTGSFSVLIRNSDKELYELASRLILDEVIGVTGSVTN
DGNLMLATKILQPDVPNSIQHRTGSHGKVVLISDVHVGSSQFLEDAWLDFLDFLKGESDS
EEMREIASQVRYLVVAGDLVDGIGIYPDQEMELDILDVYEQYRKAADYFKEIPRHIRVII
SPGNHDAVRQAEPQPALPERICADFPENVTFVGNPALVDLDGIRILIYHGRSIDDLVASV
PGVSYHEPAGAVLEMLKRRHLAPTYGSRVSISPEKKDYFIIDPVPDIIHTGHVHTLGVQR
YKNVLLVNSGTWQAQTEFQKRVNLVPVPARVPVVDLADFDVKILAFD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaattgatattgtaagggcagtaacagaagaagggtatcagataagcccttca
gcagtagagctaattaaatcaagtatttcccctgaaagccttctaaaatacgtcctttca
actattgatgactgtatttttgttattgaatctgaacatatcgatctgaaaggttttgaa
gcttcgaaaaaggcttttgacgcttctgaatctccctcgctaacactttctcgagcacag
tcaggtaacatgtccgcaggaaatatgtcttcaggaaataaaccttcagatgtcatttcc
tccccttcctcagaacccgtaaattctgataggttaaataattctgaaaaggtaaaaact
cctggttctctttcagactctctcgaggaagagggatcaactttgagtgttgaaacggaa
gtggtttcagggtttgatatccctcacaacaatccagtaacagattccgacatctctttt
tctcaggagcctgcttctgatattgctgcccacggttctctagccagtactgtttatcca
tcttctggcgggatagaaaaacaggtttcttcttttttcggagaggccggctctaaatcg
ttttctgcttttaaaagcgcttccagagctgactcctttttctcaaatgaaggagctctt
tcttcaagttccagagctgaaggagtcaggcatatttctggccttaaccccattacagtg
ctttccgacatcaccgggcattcaacctgtgtcggagagtatgtgcagttcgtgcaatac
ttcagagatagatacagcaagctctctgaaatcctcaggggcaggatgaatgcacgccct
atagaaagtttgaagaagaggagttttaggcgcggatcagacggcggtaatgaggagcta
tccattatagggattgtttcggatatcagcagcaccaataatgggcacaaaattctttct
ctggaggactctacaggctctttttcagtccttatccggaacagcgataaagaactctac
gaactggcttcgcggcttattctggatgaggttatcggagtaacaggctcggttacaaat
gacggaaaccttatgcttgctacaaagattcttcagcctgatgtcccgaacagtatacag
cacaggacaggaagccacggaaaagttgtgcttatttcggatgtacatgtgggaagttcc
cagtttcttgaagacgcctggctggattttctggattttttaaaaggagagtctgattct
gaagagatgagggagatcgcgtcccaggtccgttatctggttgttgcaggagaccttgtg
gatggaattgggatctatcctgaccaggaaatggaactcgatattcttgatgtttatgaa
cagtacaggaaagcggccgattactttaaagaaattcccagacacattcgtgtgattata
agtcccggaaaccatgatgctgtacgccaggcagaaccgcagcctgccctgcctgagagg
atctgtgcggactttcctgaaaatgtcacattcgtaggcaaccctgctcttgtggacctt
gatggaatccgaatacttatctatcacggaaggtcgattgatgatcttgtggcaagtgtt
ccgggagtttcatatcatgagcctgcaggtgcagtccttgaaatgcttaagcgcaggcat
cttgctccaacatacggaagccgcgtttccatatccccggagaaaaaagactattttata
attgatccagttcctgatattattcacaccgggcacgtccataccctgggagtccagcgc
tataaaaatgtccttctggtcaattccggaacatggcaggcacaaactgagttccagaaa
cgtgtaaatctcgttccagtgccggctcgggttccagttgtggatcttgcagattttgat
gtaaagatcctggcattcgattaa
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