Morganella morganii: MU9_228
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Entry
MU9_228 CDS
T02496
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mmk
Morganella morganii
Pathway
mmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MU9_228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmk03019
]
MU9_228
03400 DNA repair and recombination proteins [BR:
mmk03400
]
MU9_228
Enzymes [BR:
mmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MU9_228
Messenger RNA biogenesis [BR:
mmk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MU9_228
DNA repair and recombination proteins [BR:
mmk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MU9_228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AGG29274
UniProt:
M1S412
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All DBs
Position
complement(253443..255269)
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AA seq
608 aa
AA seq
DB search
MSTAEVINTLPDADAILRQVFGYQQFRAGQSDIIDTVTGGRDCLVVMPTGGGKSLCYQIP
ALMLPGLTVVVSPLISLMKDQVDQLRLLGVEAGYLNSAQTAQEQQKVLEGCHNNRIKLLY
VAPERLLMSSFIRQLQQWQPSLLAVDEAHCISQWGHDFRPEYCAIGELRQHLPGVPVIAL
TATADNTTRSDICSRLRLSDPLIHISSFDRPNIRYTLVEKYKAFDQLWMFVRGQKGQCGI
IYCNSRNKVEDVAARLQKRGLSVAAYHAGLDNSQREWVQDAFLKDNLQVVVATVAFGMGI
NKSNVRFVAHFDIPRNIESYYQETGRAGRDGVSAEAVLFYDPADMAWLRRCLDEKPAGPQ
KDIEQHKLNAMGAFAQAQTCRRLVLLNYFGENRQTPCGNCDICLDPPKQYDGLVEAQQAL
SCIYRAGQRFGLGYIVDVLRGSNNQRIREYGHDKLAVYGIGKDKSQEHWVSVLRQLIHLG
LITQNIANYSALQLTESARPVLRGEVPLQLAVPRIQNIKPRQTARSYGGNYDKKLFAKLR
KLRKSIADEENIPPFVVFNDATLIEMAEQCPVRANDLLLINGVGERKLERFGDAFMALIR
EHLTGFDD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaccgctgaagtcatcaataccctgcccgacgctgacgctatcctgcgccaggtc
tttggttatcagcaattccgtgccggacagtccgatattatcgataccgtgaccggcgga
cgcgattgtctggtggtcatgccgacgggcggcgggaaatcactgtgttatcagattccg
gcactgatgctgccggggctgacagtggtggtgtcaccgctgatttccctgatgaaagat
caggtcgatcagctgcgcctgctcggggtggaagccggttatctgaattcggcacagacc
gcgcaggaacagcagaaggtactggaagggtgtcacaataaccgcatcaaactgctgtat
gtggcaccggaacgcctgctgatgagcagttttatccgccagttacagcagtggcagccg
tcgctgctggcggtggatgaagcgcactgtatctctcagtggggacacgatttccggccg
gaatactgcgcgataggcgagcttcgccagcatctgccgggtgtgccggtgattgccctg
acggccaccgccgataataccacccgttctgatatctgctcgcggctgcgcctcagtgac
ccgctgatccacatcagcagctttgaccgcccgaatatccgctacacgctggtggaaaaa
tataaagcgtttgatcagctgtggatgtttgtccgtggtcagaaaggccagtgcggtatt
atttactgtaacagccgtaataaagtggaagatgtcgccgcccgtctgcaaaagcgcgga
ctgagtgtcgcggcgtatcatgccggcctggataattcacagcgtgaatgggtccaggat
gctttcctcaaggacaacttacaggtcgtggtcgccacggtggcattcgggatggggatt
aacaaatccaacgtccgttttgtcgcgcactttgatatcccgcgcaatattgagtcctat
tatcaggaaaccggccgtgcaggacgtgacggggtcagtgcggaagcggttctgttttat
gacccggcggatatggcgtggctgcgccgttgtctggatgaaaaaccggccgggccgcag
aaagatatcgaacagcacaagctgaatgccatgggcgcgtttgcccaggcacagacctgc
cgccgtctggtattgctcaattacttcggtgagaaccgccagacaccgtgcggtaactgc
gatatctgcctggatccgccgaaacagtatgacgggctggttgaggcacagcaggcgctg
tcctgcatctaccgcgccgggcagcgttttggtctggggtatattgtggatgtgctgcgc
ggctcgaataatcagcggatccgtgaatacggacacgacaaactcgcggtttacggtata
ggcaaagataaaagccaggaacactgggtcagtgtgctgcgccagttgatccacttaggg
ctgataacgcaaaacatcgccaattattctgcgttacaattaaccgaatccgcccgtccg
gttctgcgcggcgaagtaccgctgcaactcgcggtgccgaggatccagaatatcaaaccg
cgtcagactgcccgcagctacggcggtaattacgacaaaaaactgttcgcgaaattgcgc
aagctgcgcaaatccattgcggatgaggaaaatatcccgccgtttgtggtgtttaacgat
gccacactcattgaaatggcggaacaatgcccggtcagggcaaatgatttactcttgata
aatggcgtcggagagcggaaactggaacgattcggcgatgcatttatggcccttatccgc
gagcatctcaccggatttgatgactaa
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