Mycobacterium sp. MOTT36Y: W7S_06570
Help
Entry
W7S_06570 CDS
T02113
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mmm
Mycobacterium sp. MOTT36Y
Pathway
mmm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
W7S_06570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmm03021
]
W7S_06570
03019 Messenger RNA biogenesis [BR:
mmm03019
]
W7S_06570
Transcription machinery [BR:
mmm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
W7S_06570
Messenger RNA biogenesis [BR:
mmm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
W7S_06570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
DUF7440
Fungal_virus_P2_C
VWA_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFJ34297
LinkDB
All DBs
Position
1363201..1365069
Genome browser
AA seq
622 aa
AA seq
DB search
MTDTDLFTAGENTDANQLSNAVTTDTPDAKTNASAGALSTMVLPELRALANQVGVKGTSG
MRKNELIAAIKEVRGQANGVPANGTKSTEDSGKPDTKDDDTKDTKDDNGADAPAAKEGQN
GAAPTEAPRRERRGASRDAGSTDRANEDADRERAGGRDGGATGETDGREGKQDKDNQNEN
RGQGGGSEDQQGSGGQQGRGGSNQQDDDGEGRGGRRGRRFRDRRRRGERSGEGGDAELRE
DDVVQPVAGILDVLDNYAFVRTSGYLAGPHDVYVSMNMVRKNGLRRGDAVTGAVRVPKEG
EQPNQRQKFNPLVRLDSVNGGSVEDAKKRPDFSKLTPLYPNQRLRLETTPDRLTTRVIDL
IMPIGKGQRALIVSPPKAGKTTILQDIANAITKNNPECHLMVVLVDERPEEVTDMQRSVK
GEVISSTFDRPPSDHTQAAELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGRI
LSGGVDSTALYPPKRFLGAARNIEEGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELK
LDRKISERRVFPAVDVNPSGTRKDELLLSPDEFGIVHKLRRVLSGLDSHQAIDLLMSQLR
KTKTNYEFLVQVSKTTPGMDND
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctgttcacggctggcgaaaacactgacgccaatcaactgtctaat
gccgtgaccaccgacactcccgacgcgaagacgaacgcttcggccggcgccctgtccacc
atggtgctgcccgagctacgcgcgctggctaaccaggtcggcgtcaaagggacgtcggga
atgcgtaagaacgaactgatcgccgcgatcaaagaagtcaggggacaggccaacggcgtg
cccgccaacggcacgaagtccactgaggacagcggcaagccggacaccaaagacgacgac
accaaagacaccaaggacgacaacggcgctgacgcaccggcggccaaggaaggccagaac
ggcgcggcccccaccgaggcgccccgccgcgaacgacgcggcgcttcccgcgacgcggga
tcgaccgaccgcgccaacgaggatgccgatcgcgagcgcgccggcggccgagatggcggc
gccaccggcgagaccgacggccgcgaaggcaagcaggacaaagacaaccagaacgagaac
cgcggccagggtggcgggagcgaggatcaacagggctccggcggccagcagggccgtggc
gggtcgaaccagcaggacgacgacggcgaaggacgcggcggccggcggggacgccgcttc
cgcgaccgccggcgccggggcgagcgctccggagagggcggcgacgccgaactgcgcgag
gacgacgtcgtccagccggtagccggcattcttgacgtcctcgacaattacgcgttcgtg
cgcacctccggctacctggccgggccccatgacgtttacgtgtcgatgaacatggtgcgc
aagaacggcctgcgccgcggtgacgccgtcaccggcgcggtgcgcgtgccgaaggaaggc
gagcagcccaaccagcggcagaagttcaacccgctggtacgcctggacagcgtcaacggc
ggctcggtcgaggacgccaagaagcgccccgatttctccaagctgacgccgctgtatccc
aaccagcgtcttcgcctggaaaccacgcccgaccggctgaccacgcgggtcatcgacctg
atcatgccgatcgggaagggccagcgtgcgctgatcgtgtcgccgcccaaggcgggtaag
acgacgatcctgcaggacatcgccaacgcgatcaccaagaacaacccggaatgccacctc
atggtcgtgctcgtcgacgagcggcccgaggaggtcaccgacatgcagcgttcggtcaag
ggtgaggtcatctcctcgaccttcgaccggccgccgtccgatcacacccaggccgccgag
ctggccatcgagcgggccaagcggctcgtcgagcagggcaaggacgtcgtcgtgctgctg
gactcgatcacacgcctcgggcgcgcctacaacaacgcctcgccggcgtcgggccgcatc
ctgtccggtggtgtcgactccaccgcgctgtacccgcccaagcgcttcctgggcgccgcg
cgcaacatcgaggagggcggctcgctgaccatcatcgccaccgcgatggtcgagacgggg
tccaccggtgacacggtcatcttcgaggagttcaagggcaccggtaacgccgagctcaag
ctggaccgcaagatctccgaacgccgggtcttcccggcggtcgacgtgaacccctccggc
acccgtaaggacgaactgctgctgtcgccggacgagttcggcatcgtgcacaagctgcgc
cgcgtgctgtcgggcctggattcccaccaggccatcgacctgctgatgtcgcagctgcgc
aagacgaagaccaactacgagttcctggtccaggtgtccaagacgacgcccgggatggac
aacgactag
DBGET
integrated database retrieval system
