Mycobacterium sp. MOTT36Y: W7S_07600
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Entry
W7S_07600 CDS
T02113
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mmm
Mycobacterium sp. MOTT36Y
Pathway
mmm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
W7S_07600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmm03019
]
W7S_07600
03009 Ribosome biogenesis [BR:
mmm03009
]
W7S_07600
Enzymes [BR:
mmm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
W7S_07600
Messenger RNA biogenesis [BR:
mmm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
W7S_07600
Ribosome biogenesis [BR:
mmm03009
]
Prokaryotic type
rRNA processing factors
W7S_07600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AFJ34499
UniProt:
I2AB25
LinkDB
All DBs
Position
1603285..1606032
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AA seq
915 aa
AA seq
DB search
MARTLGTTSKRVLDALSELDGRIRSAHSTVDRADAVRVRDLLAAQPQEAPDAATEPVVDG
GEGAGEPESRLMLETPDNAAERPHYMPLFVAPQPLDSDDDSDTDTDEGADSDDSDGDDDE
QADRPSNRRRRRGRRGRGRGRGEQGGPEGQNDGDDDEPQGRVKKGAQSDSGDSDEADDED
SDDGDDSEGGDDGSADGGSRRRRRRRRRKSGSGDDNDEGPSPDDPPNTVVHERPPRNGKN
GGDGGSASNEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLTEAEFLARREAVERVMVVR
DRVRSEPPHQGSRYTQIAVLEDGIVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVD
IGRGRNGVLYAGEVNWEAAGLGGSDRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSL
AGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASEGVKEDDIRNDV
TRLQERWKQIEAKAIEIKEKAAGAAVALYEEPDVLVKVIRDLFNEDFAGLVVSGDEAWNT
INEYVNSVAPDLVSKLSKYEPPAGPDGSSGPDVFAVHRIDEQLAKAMDRKVWLPSGGTLV
IDRTEAMTVVDVNTGKFTGSGGNLEQTVTKNNLEAAEEIVRQLRLRDIGGIVVIDFIDMV
LESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTSCPNCGGRG
ILLHTDPVDSAPSNGRKSESGGRRGRRKKNKAEEPVVAKVPVHAPGEHPMFKAMAAGSST
QATTEDDESDEATEETGDEFDEKKARRGEDVSDADQEDFDDTDDDSDDDSEDDSDDDSDD
DSDDDDLDDEEDLGDDDEDLELDDDDLDTEDSDDSDDSDDADGGSAAADQGGPPPGRPRR
RRAAGRPAGPPIHAD
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
ttggcccggacgctgggaaccaccagcaaacgggtcctggacgcgctcagcgagctggac
gggcgcattcgcagcgcacattccaccgtggaccgcgccgacgcggtgcgggtgcgtgac
ctgctggccgcccagccccaggaagccccggacgccgccaccgaacccgtcgtggatggc
ggcgagggtgccggcgaacccgaatcccggctgatgctggaaacccccgacaacgccgcc
gagcggccgcattacatgccgctcttcgtcgcgccgcagccactggacagcgacgacgac
agcgacaccgacaccgacgagggcgccgactccgacgattccgacggcgacgacgacgag
caggccgaccgcccgtcgaatcggcggcgccgtcgcggccgccggggccgcggccgcggg
cgcggcgagcagggcggacccgagggccagaacgacggcgacgacgacgagccgcagggc
cgggtcaagaagggcgcccagtccgactcgggcgattccgacgaggccgacgacgaggac
tccgacgacggcgacgactccgagggcggtgacgacggttcggcggatggtggcagccgt
cgccgccggcggcgacggcgccgcaaatccggatcgggcgacgacaacgacgaggggcct
tcacccgacgacccgcccaacacggtcgtgcacgagcggccgccccgcaatggcaagaac
ggcggcgacggcggcagcgcgagcaacgagatcaagggcatcgacggctcgactcggctg
gaggccaagcgccaacgacgccgcgacggccgcgacgccgggcggcgccgccccccggtg
ctgaccgaggccgaattcctggcccgccgcgaggccgtcgaacgcgtcatggtcgtccgg
gaccgggtccgcagcgagccgccgcaccagggttcgcggtatacccagatcgcggtcctc
gaggacggcatcgtcgtcgagcacttcgtgacctcggccgcgtcggcgtccctggtcggc
aacatctacctcggcatcgtgcagaacgtgctgccctcgatggaggcggccttcgtcgac
atcggccgcggccgcaacggcgtgctctacgccggcgaggtcaactgggaggccgccgga
ctcggcgggtccgaccgcaagatcgaacaggcgctcaagcccggcgactatgtcgtcgtc
caggtcagcaaggacccggtcgggcacaagggggcgcggctcaccacgcaggtgtcgctc
gcgggtcgctacctggtctatgtgccgggggcgtcgtcgaccgggatcagccgcaagttg
cccgacaccgaacgccagcgcctcaaggagattctgcgcgaggtggtgccgtccgacgcg
ggggtgatcatccggaccgcgtccgagggcgtcaaggaagacgacatccgcaacgacgtc
acccgcctgcaggagcgctggaagcaaatcgaggccaaggccatcgagatcaaggagaag
gccgccggggcggctgtggcgctctacgaagagcccgacgtgctggtcaaggtcatccgc
gacctgttcaacgaagacttcgcgggcctggtcgtctccggggacgaggcctggaacacc
atcaacgaatacgtgaattccgttgcgcccgaccttgtttcgaagctgagcaaatacgag
cctcctgccgggccggacgggtcgagcgggccggacgtgttcgccgtgcaccgcatcgac
gagcagctggccaaggcgatggaccgcaaggtctggctgccctcgggcggcaccctggtg
atcgaccggaccgaggcgatgacggtggtcgacgtcaacaccggcaagttcaccggctcc
ggggggaacctcgagcagacggtcacgaagaacaacctcgaggcggccgaggagatcgtg
cgccaactgcggctgcgcgacatcggcggcatcgtcgtcatcgacttcatcgacatggtg
ctggaatccaaccgcgatctggtgctgcgccggctcaccgaggcgctggcccgtgaccgc
acccgccatcaggtgtccgaggtgacgtcgctcggtttggtgcagctgacccgcaagcgg
ttgggcaccggactggtcgaggccttctcgacgtcgtgcccgaactgtggcggccgcggc
atcctgctgcacaccgacccggtggactcggcgccgtcgaacggccgcaagtccgagtcc
gggggccgtcgcggccggcgcaagaagaacaaggccgaggagccggtggtggcaaaggtg
cccgtccacgctcctggcgaacacccgatgttcaaggcgatggcggccggctcgtccaca
caggcgacaaccgaggacgacgaatccgacgaggccaccgaggaaaccggcgacgagttc
gacgagaagaaggcgcggcgcggcgaggacgtctccgacgcggaccaagaggacttcgac
gacaccgacgacgactcggacgacgactccgaagacgactcggacgacgattccgacgac
gactcggacgacgatgacctcgatgacgaggaagacctgggcgacgacgacgaggacctc
gaactcgacgacgacgacctggacaccgaggactccgacgattccgacgactccgacgat
gccgacggtggttcggccgcggctgaccagggcggcccgcccccggggcgcccccggcgc
cgacgcgcggcgggcaggcccgccgggccgccgatccacgcggactga
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