Marmota marmota marmota (Alpine marmot): 107134509
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Entry
107134509 CDS
T09644
Symbol
Rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04068
FoxO signaling pathway
mmma05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
107134509 (Rag1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
107134509 (Rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107134509 (Rag1)
Enzymes [BR:
mmma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107134509 (Rag1)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107134509 (Rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1
RAG1_DNA-bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-C3HC4_4
zf-RING_10
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
107134509
NCBI-ProteinID:
XP_015332091
Ensembl:
ENSMMMG00000011298
UniProt:
A0A8C5ZC04
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MAVSLPPTLGISSAPDEIQHPHMKFSEWKFKLFRVRSFEKTTDETQKEKKDSLEGKPSLE
QSPAVLDKSGGPKPVLTQPALKGHPKFSKKSHDSGKARDKAVHQANLRHFCRICGNSFKT
DKHDRRYPVHGPVDAKTQILLRKKEKRVTSWPDLIARVFRIDVKADVDSIHPTQFCQNCW
GIMHRKFSSAPREVYFPRNATMEWHPHTPSCDICHTARRGLKRKSHQPNLQLSKKLKTVL
DRARQARQRKRRAQARISSKEVMKKITNCNQIHLSTKLLAVDFPAHFVKSISCQICEHIL
ADPVETSCKHVFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLSILNSLVVKCPA
EECNEEISLEKYNHHVSSHKESKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKMQVKA
FADKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSDLPPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKILLPGYHPFEWQPPLKNVSSNTDVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDAALVSALMDMEEDILEGMRSQDLDDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPAVPEKAVRFSFTIMKISIAHGAQNVKVFEEAKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSELMLEMGGILRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHAENLERYEVWRSNPYHESVEELRDRVK
GVSAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPSAERHEALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKSSGFTMN
SKANLGDPLGIEDSLESQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccttgcctcccaccttgggaatcagttctgcacccgatgaaattcaacac
ccacatatgaagttttcagagtggaaatttaaactattcagggtgagatcctttgaaaag
acaactgatgaaactcaaaaggaaaaaaaggattccttggagggaaaaccttctctggag
caatccccagcagtcctggacaagtctggtggcccaaagccagtcctgactcaaccagct
ctgaagggccatcctaagttttcaaagaaatcccacgacagtgggaaagcaagagacaaa
gcagttcaccaagccaaccttcgacacttctgccgcatctgtgggaattcttttaaaaca
gataagcacgacaggagatacccagtccatgggcctgtggatgctaaaacccaaatcctc
ttacgaaagaaggaaaagagagtcacttcctggccagacctcatcgccagggttttccga
atcgatgtgaaggcagatgttgactccatccaccccacccagttctgccagaactgctgg
ggcattatgcacaggaagtttagcagcgccccacgtgaggtttacttcccaaggaatgcg
accatggagtggcatccccacacaccatcctgcgacatctgccacactgcccgccggggc
ctcaagaggaagagccatcagccaaacctgcagctcagcaaaaaactcaaaactgtgctt
gaccgagcaagacaagcccgtcagcgcaagagaagagctcaggcaaggatcagtagcaag
gaggtcatgaagaagatcaccaactgcaatcagatccatctgagtaccaagctcctggcc
gtggacttcccagcacactttgtgaaatccatctcctgccagatttgtgaacacattctg
gccgaccctgtggagaccagctgtaagcatgtgttttgcaggatctgcattctcagatgc
ctcaaagtcatgggcagctattgtccctcttgtcgatatccgtgcttccccaccgacctg
gagagtccagtgaagtccttcctgagcatcttgaattccctggtggtgaaatgcccagca
gaagagtgcaatgaagagatcagcttggaaaaatataatcaccatgtctcaagccacaag
gaatccaaagagacttttgtgcatattaataaaggaggcagaccccgtcaacatcttctg
tcactcactcgaagagctcagaagcaccggctgagggagctgaagatgcaagtcaaggct
ttcgctgacaaagaagaaggtggagatgtgaagtctgtgtgcctgactttgttcctgctg
gccctgagggcaagaaatgagcacagacaagccgatgagctggaggccatcatgcaggga
cggggctctgatctgccgcctgctgtttgcttggccattcgtgtcaacaccttcctcagc
tgcagtcagtaccacaagatgtacaggactgtgaaagccatcacagggaggcagattttt
cagcctctgcatgcccttcgcaatgcagagaagatccttctgccaggctaccaccccttt
gagtggcagccacctctgaagaatgtgtcttcaaacaccgatgttggcattattgatggg
ctgtctgggctttcctcctcggtggatgattacccagtagacaccattgcaaagagattc
cgctacgatgcagctttggtgtctgccttgatggacatggaggaagacatcttggaaggc
atgagatcccaagaccttgatgactacctgaacggtcccttcactgtcgtggtgaaggag
tcttgtgatggcatgggagacgtgagcgaaaagcatgggagtgggccagcagttccagaa
aaggcagttcgcttttcattcaccatcatgaaaatttcaatagcacatggcgcccagaat
gtgaaggtgtttgaggaggccaaacctaactccgaactgtgttgcaagccattgtgcctt
atgctggcagatgagtctgaccacgagaccctgactgccattctgagccctctgattgcc
gagagggaagccatgaagagcagcgaactgatgctggagatgggaggcatcctcaggacc
ttcaagttcatcttcaggggaactggatacgatgaaaaacttgtccgggaagtggaaggc
ctcgaggcgtctggctcagtctacatttgtacactttgtgatgccacccgcttggaagcc
tctcaaaatcttgtcttccactccataacgagaagccatgctgagaatctggagcgctac
gaggtctggcgctccaacccataccacgagtctgtggaagaactgcgggatcgagtgaaa
ggggtctctgccaagccttttattgagacagtcccttccatagatgcactccactgtgac
atcggcaatgcagctgagttctacaagattttccagctggagataggagaggtatataaa
aatcccaatgcctccaaagaggaaaggaaaagatggcaggccaccctggacaagcatctc
cggaagaagatgaacctgaagccaatcatgaggatgaatggcaactttgccaggaagctc
atgaccaaagagactgtggaggcagtgtgtgaattaattccttctgcagaaaggcacgaa
gctctcagggagctgatggacctttacctgaagatgaaacccgtgtggcgctcctcatgc
cctgctaaagagtgcccagagtccctctgccagtatagcttcaactcacagcgttttgct
gagctcctctctaccaagttcaagtatagatacgagggcaaaatcaccaactattttcac
aaaaccttggcgcatgtgcctgaaattatcgagagggatggctctatcggggcctgggca
agtgagggaaatgagtctggcaataaactatttaggcgcttccggaaaatgaatgccagg
cagtctaagtgctatgaaatggaagatgtcctgaagcaccactggctgtatacttccaaa
tacctccagaagtttatgaacgctcataatgcattaaaaagctctgggtttaccatgaac
tcaaaggcaaacttaggggacccattaggcatagaagactctctggaaagccaagattca
atggagttttaa
DBGET
integrated database retrieval system
