Marmota marmota marmota (Alpine marmot): 107135536
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Entry
107135536 CDS
T09644
Name
(RefSeq) protocadherin beta-5-like
KO
K16494
protocadherin beta
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmma04515
]
107135536
Cell adhesion molecules [BR:
mmma04515
]
Cadherins
Protocadherins
107135536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
DUF7529
Motif
Other DBs
NCBI-GeneID:
107135536
NCBI-ProteinID:
XP_015332935
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MQTALAKPPQKRQVIFLAMLLFLWEADSEALRYSIPEEIESGYSVANLAKDLRLRVGELA
TRGAQIHHKGSKQLLQLDVKTGNLLLQEKLDREVLCGATEPCILHFQLLLENPVQLFQVD
VHLIDVNDHSPEFLDREMILRIPESAQPGTVFALKSAQDLDMGSNSVQNYTISPNSYFRV
ATHNREDGKKYPELVLEKALDQEEEPELSLTLTALDGGAPPRSGTVTVRIEVVDINDNAP
EFLQSRYEVQVPENSPINSLILIVSAQDLDAGTHGSVAYSLFEGDEVSQPFVIQEKTGEI
RLQRALDFEATQYYNVEIVATDSGGFSGKCTVAIEVVDVNDNAPELTMSTLSSSIPENSP
EAVVAIFSVSDPDSGDNGRMVCSIENDLPFFLKPAFKNFYTLATERPLDRESRAEYNITI
TVTDLGSPRLNTEHNITVLISDVKDNVPDFTQTTYTLLVRENNSPALHIGSVSATDRDSG
TNAQITYSLLPNQDPHLPLASLVSINADNGQLFALRALDFEALQAFEFRVGATDQGSPAL
SSQALVLVVVLDDNDNSPFVLYPMQNASAPCTELVPRAAEQGYLVTKVVAVDEDSGQNAW
LSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAARHRLVVLVKDNGEPPLSASVTLHVL
LVDGFSQPYLPLPEAPPERAQGDSLTVYLVIALASVWSLFLFSVLVFLAVRLCRRHRVDS
QGVYSMPEGHFPGHLVDISGTGTLSQSYQYEVCLTRDSGNRDFKFLKPVYPILPPQSARE
ENQ
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgctctagcaaaacccccgcagaaaaggcaagtcatttttcttgctatgctg
ttgtttttgtgggaggctgactctgaggcacttaggtattccattccagaagaaatagaa
agcggctactctgtggccaacctggcaaaagatctgaggctcagggtgggggagctggcc
actcggggagcgcaaatccatcacaaaggcagcaaacagctcttgcagctcgatgtaaaa
accggcaatttgcttctacaggaaaaattagaccgggaggtgctgtgtggggcgacagaa
ccctgtatattgcatttccaactgttactagaaaacccggtgcagttgtttcaagttgat
gtgcatctcatagatgtaaatgaccattctccagagttcctagacagggaaatgatcctt
agaatcccagagagtgcccagccagggactgtgtttgctttgaaatcagctcaggatttg
gacatgggtagcaacagtgttcagaactacacaattagcccaaactcgtattttcgtgtt
gctactcacaatcgtgaggatggcaaaaaatacccagagctggtgttggagaaagccctg
gaccaggaggaagagcctgagctcagtttaaccctcacagcgctggatggtggggccccg
cccaggtctgggactgtcacagttcgaattgaggtggtagatatcaatgataatgccccc
gaatttttacagtcccggtatgaggtacaggttcctgagaacagtcccataaactcgtta
attctcattgtctctgctcaagatttagatgcaggaactcatgggagtgtagcctattct
ttattcgaaggtgatgaagtttctcaaccctttgtaatacaggaaaaaacaggagaaatt
cgtctgcaaagggcattggatttcgaggcaactcaatattataacgtggaaattgtagcc
acagatagtgggggcttctcaggaaaatgcacagtggccatagaagtggtggatgtgaat
gacaatgctcctgaactaaccatgtccacactcagcagctctatcccagaaaactcccca
gaggctgtagttgccattttcagcgtttctgatccagactctggggacaatggtaggatg
gtttgctccatagaaaacgatctccccttcttcttgaaacccgcatttaagaatttttat
accttggcgacagagaggccgctggacagagagagcagagcagagtacaacatcaccatc
acagtcactgacttggggtcacctaggttgaataccgagcacaacataactgttctcatc
tctgacgtcaaggacaatgtccctgacttcacgcaaacgacatacacgttgttagtccgc
gagaacaacagccctgccctgcacataggcagtgtcagcgccacagacagagactcaggc
accaatgcccagatcacctactcgctgctgccaaaccaggacccgcacctgcccctcgcc
tcgctggtctccatcaacgcagacaatgggcagctgttcgcgctgagggcgctggacttc
gaggccctgcaggcattcgagttccgcgtgggcgccacagaccaaggctcgccagcactc
agcagccaggcgctggtgctcgtggtggtgctggatgacaacgacaactcgcccttcgtg
ctgtacccaatgcagaacgcctctgcgccctgcactgagctggtgcccagggcggcagag
cagggctacctggtcaccaaggtggtggcggtggatgaagactcaggccagaacgcctgg
ctgtcataccagctgctcaaggccacggagccagggctgtttggcgtgtgggcgcacaat
ggcgaggtgcgcactgccaggctgctgagcgagcgcgacgcggccaggcacaggctggtg
gtgctggtcaaggacaatggcgagcctccgctgtctgccagtgtcacgctgcacgtgctg
ctggtggatggcttctcccagccctacctgccgcttccggaagcgccaccggagcgcgcg
cagggggactcgctcactgtctacttagttatcgccttggcttctgtgtggtcgctcttc
ctcttctctgtgctggtgttcttggcggtgaggctgtgcaggaggcacagggtggactcg
cagggtgtctattctatgcctgagggccactttcctggccacctggtggatatcagtggt
actgggaccctgtcccagagctatcagtatgaggtttgtttgaccagagactctgggaat
agagacttcaagttcctgaagcctgtatatccaatcctacctcctcagagcgctagagaa
gaaaaccagtaa
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