Marmota marmota marmota (Alpine marmot): 107135569
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Entry
107135569 CDS
T09644
Symbol
Nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013
Nucleocytoplasmic transport
mmma05014
Amyotrophic lateral sclerosis
mmma05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107135569 (Nup98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
107135569 (Nup98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
107135569 (Nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107135569 (Nup98)
03036 Chromosome and associated proteins [BR:
mmma03036
]
107135569 (Nup98)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107135569 (Nup98)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107135569 (Nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
107135569
NCBI-ProteinID:
XP_015333000
Ensembl:
ENSMMMG00000012428
UniProt:
A0A8C6ET63
LinkDB
All DBs
Position
Unknown
AA seq
1817 aa
AA seq
DB search
MFNKSFGTPFGGSTGGFGTTSTFGQNTGFGTTSGGGAFGTSAFGSSSNTGGLFGNSQTKP
GGLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGN
FGTSTNSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATG
LFSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQNTG
FSFGNTSTLGQPSTNTIGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQTNTGFGA
VGSTLFGNNKLTTFGTSTTSASSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGNSI
FGSKPAPGTLGTGLGAGFGTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGF
GAPQAPIALTDPNATAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPA
AQKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKK
LVLKNLNNSNLFSPVNRDSEDLASPSEYPENGERFSFLSKPVDENHQQDGDDDSLVSRFY
NNPIAKPIPQTPENSGSKHNSSNSVDDSIVALNMRVALRNGLEGSSEETSFHDESLQDDR
EEIENSAYHVHPAGIVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEG
DVNLTNLNLDDIVHIRRKEVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKS
PDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPSKT
STKKLKTAPLPPAGQTTPFQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVL
DSVLEESVPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDTMDQHFSHLSSKG
DTSQEICSPRLPISASHSSKSRSLVGGLLQSKFTSGVFLSPSASVQECRTPRVSSLMNIP
STSSWSVPPPLTTVFTVPSPAPEVQLKTVGTRRQPGLVPLEKSVTFGKGKLLMDMALFMG
RSFRVGWGPNWTLANSGKQLNGSHELENHQLADSMEYGFLPNPVVVKSLTESPFKVHLEK
LSLRQRKLDEDLQLYQTPLELKLKHSTVHVDELCPLIVPNPGVAVIHDYADWVKNASREL
LETQIVKHWSLTWTLCEALWGHLKELDSQLDEPSEYIQILERRRAFSRWLSHTAAPQIEE
EVSLTRKDNPVEAVFSYLTGSRISEACSLAQQSGDHRLALLLSQLVGSQSVRELLTMQLV
DWHQLQADCFIQDERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTA
SISRALSMYEEAFQNTSEGDRYACSPLPSYLEDSGCVVEEEQDSRRPLQDVCFHLLKLYS
DRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQSKGVLQASYAGQLESEG
LWEWAIFVLLHIDNSSMREKAVRELLTRHCQLMETPESWAKETFLTQKLCVPAEWIHEAK
AVRAHMECDKHLEALYLFKAGHWNRCHKLVIQHLASDAIINENYDYLKGFLEDLAPPERS
TLIQDWEMSGLVYLDYIRVIEMLHHIQQVDCSGYELEQLHTKVTSLCSRIEQIQCYNAKD
RLAQSDMAKRVANLLRVVLSLQHAPDATSDSTPDPHRVPLRLLAPHIGRLPMPEDYALEE
LRSLTQSYLRELTVGSQ
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaaccccctttgggggtagcacaggtggctttggcacaact
tcaacatttgggcagaatactgggtttggcactactagtggaggaggggcatttggaaca
tctgcatttggttctagcagcaatactggaggcctatttggaaattcacagaccaaacca
ggaggattatttggtacaaattcattcagtcaaccagctacctccacaagcactggcttt
gggtttggtacatcaacaggaacatcaaatagcttgtttggaactgcaagtacaggaacc
agtcttttctcatctcaaaacaatgcctttgcacaaaataaaccaactggctttgggaat
tttggaacaagtactaacagtgggggactcttcggaactacaaataccacctctaatcct
tttggtagcacgtctggctctctctttgggccaagtagttttacagcggcacctactggg
actactattaaatttaatcctccaactggtacagatactatggtcaaagctggagttagc
actaacatcagtaccaaacatcagtgtattactgctatgaaagaatatgaaagcaagtca
ttagaggaacttcgtttagaggattatcaggctaaccgtaaaggcccacagaaccaggtg
ggagcaggtaccacaactggcttgtttgggtcttctccggccacctccagtgcaacagga
ctcttcagctcttccactactaattcaggatttgcatatggtcagaacaaaactgccttt
ggaacgagtacaactggatttggaacaaatccgggtggtctctttggccagcagaatcag
cagactactagcctcttcagcaaaccatttggccaggccacaaccacacagaacactggt
ttttcctttggtaataccagcacccttggacaaccaagcaccaacaccataggtttattt
ggagtaacgcaagcctctcagccaggaggtctttttgggacagctacaaacaccagtact
gggactgcatttggaacaggaacaggtctctttgggcagaccaatactgggtttggtgca
gttggttcgaccctgtttggcaataacaagcttactacctttggaaccagcacaaccagt
gcttcttcatttggtacaaccagtggcgggctctttggtaacaaaccaaccctgacttta
ggaaccaatacaaacacttccaattttggctttggcacaaataccagcgggaatagtatt
tttggaagtaaaccagcacctgggactctgggaactgggcttggtgcaggatttggaaca
gctcttggtgctggacaggcatctttgtttgggaacaaccaacctaagatcggagggcct
cttggtacaggagcctttggggcccctggatttaatactacgacagccactttgggcttt
ggtgccccccaggccccaatagctctgacagatccaaatgctactgctgcccaacaggct
gttctccaacaacaccttaatagtttaacatactcaccttttggagactcccctctcttc
cggaatcctatgtcagaccctaagaagaaagaagagagattgaaaccaacaaatccagca
gcccagaaggctcttactacacctactcattataaactgacaccccgacctgccaccaga
gttcgtccaaaggctttacaaacaacaggcacagccaaatcacatctctttgatgggctg
gatgatgatgaaccatccctagccaatggagcattcatgcctaagaagagtatcaagaag
ttggttttgaagaaccttaacaatagcaatctcttttctcctgttaatcgtgattcagaa
gacctagcttcaccatctgaatatccagaaaatggtgagagatttagtttcctgagcaaa
cctgtagatgagaaccatcagcaggatggtgatgatgattctcttgtatcgcgtttttat
aataatcctattgccaaacccattcctcaaaccccagagaattctggaagtaaacacaac
agtagcaatagtgtggatgattcaattgttgcattaaacatgcgggttgctttgcgaaat
ggactggaaggaagcagtgaagaaacctcctttcatgatgagtcactgcaagatgacaga
gaagaaatagaaaatagtgcttatcatgtgcatccagcaggcattgtcctcactaaggtt
ggttactacactattccatctatggatgatcttgccaaaattaccaatgaaaaaggagag
tgcattgtctctgacttcaccattggtcgtaaaggttatggctctatctattttgaaggt
gatgtgaatttgaccaatctaaatttggatgatattgtgcatatccgaaggaaagaagtt
attgtctacttagatgataaccagaaaccacctgtgggcgaaggactaaataggaaggct
gaagttaccttggatggggtttggccaacagataaaacatcccgttgtttaataaagagc
ccagatcgacttgctgatatcaactatgaggggagattggaagcagtttcaaggaaacaa
ggagctcagttcaaagagtacagacctgaaactggttcttgggtgtttaaggtgtcccat
ttttctaaatatggccttcaggattctgacgaagaggaggaagaacatccatccaaaact
agtacaaagaagttgaagactgcccctttgcctcctgcaggccaaactaccccttttcag
atggctcttaatggcaaacctgcacctccacctcagagccagagcccagaggtggaacag
ttagggagggttgtagaactggacagtgacatggtagatatcacccaggagccagttttg
gattccgtgttagaagagagcgtgcctgaggatcaggaacctgtgtctgcctcaacacac
attgcatcttccctgggaattaatccacatgtcttacagatcatgaaagcatcattgctt
gctgatgaagaagatgtagatacaatggatcaacacttcagtcatctttcttccaaagga
gatacttctcaagaaatatgttctcccagactccccatttcagcatcccactcatcaaaa
tctcgttcactagttggtgggttactacaatcaaaatttacaagtggagtttttctttca
ccaagtgcctctgtgcaagaatgtcgcactcccagagtatcatctttaatgaatatccca
tccacatcctcttggtctgtccctccccccttgaccactgtgtttacagtgcccagccca
gccccagaggttcagttgaaaacagtaggtacacgcaggcaaccaggcctagtccctctt
gaaaagtctgttacatttggcaagggaaaactcttgatggacatggccctattcatggga
cgctcatttcgggttggttggggccccaactggactcttgctaatagtggaaaacaactg
aatggctctcatgaactggaaaatcatcagcttgctgattctatggaatatggattcctg
cccaatccagtagttgttaaatcactgactgagtctccattcaaagttcatttggaaaaa
ctcagtttgaggcagaggaagctagatgaagatctacaattataccagacacctctggag
cttaaattaaaacatagcactgtccatgtggatgaactgtgtcctctcattgtccccaat
ccgggtgttgctgtcattcatgactatgcagattgggttaagaatgcatctagagaatta
ttggaaacacaaattgtgaagcactggagcctgacatggactctatgtgaagccctatgg
ggccacctgaaggagcttgacagccaattggatgagcccagtgaatacattcagattctg
gagcgaagaagagcattctctcgctggctatcccacactgctgctcctcagattgaagag
gaagtctccctaacccgaaaagacaacccagtagaagctgtcttcagctacctcacaggc
agtaggatcagtgaagcctgctctttagcacagcagtcaggtgatcaccgtcttgccctt
cttttatctcagttggtgggtagccagtcagttcgggagctgctcaccatgcaactggtg
gattggcatcagctccaggctgactgcttcatccaggatgagagactacgcatctttgcc
ctgttggctggaaaaccggtgtggcagctttcagagcagaagcaaatcaatgtgtgttct
cagctagattggaaacgctcccttgctgttcatctttggtatttgcttccaccaacagcc
tccatttccagggcactcagcatgtatgaagaagcatttcagaatacctctgaaggtgac
agatatgcctgctccccacttccttcatacttggaggattctggctgtgtggtagaggag
gagcaagactcacggagaccacttcaagacgtctgctttcaccttctgaaactttacagt
gacagacattatgatctcaatcagctgttggagcctcgaagcatcaccgcagatcctttg
gattaccgcctaagctggcatctgtgggaggtgctgcgagctcttaactatacccatctc
tcagagcagtctaagggtgtgctgcaggccagttatgctggccaacttgaaagtgaaggg
ctctgggagtgggccatcttcgtcctcttgcacattgacaactcgagcatgcgtgagaaa
gctgttcgagagctacttacccggcactgccagctaatggagacccctgaatcttgggct
aaggagactttccttacgcagaagctttgcgtgcctgctgaatggattcatgaagccaaa
gcagtgcgagcacacatggaatgtgataagcacttggaggccctctacttgtttaaagct
ggtcactggaaccgctgccacaaacttgtcatccagcacttagcttctgatgccatcatt
aatgagaactatgattacctgaaggggttcttggaagacctagcacctccagagcgcagc
actctaattcaggactgggaaatgtctggactcgtttatctggactatattcgagtcatt
gaaatgctccaccatattcagcaggtggattgctcaggttatgaactagaacagttacac
accaaagtgacatcactgtgcagccggatagagcagattcagtgttataatgccaaggac
cgcctggctcagtcagacatggccaaacgtgtagccaacttgctgcgggtggtactgagc
ctgcagcatgcccctgatgcaacctctgattcaacgccagaccctcatcgagtccctttg
cgcctgttggctccccacattggtcggctccccatgcctgaggactacgccttggaggaa
ctgcgcagcctcacacagtcctatctgcgagaactgactgttggaagtcagtga
DBGET
integrated database retrieval system
