Marmota marmota marmota (Alpine marmot): 107135661
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Entry
107135661 CDS
T09644
Symbol
Arntl
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04710
Circadian rhythm
mmma04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
107135661 (Arntl)
09159 Environmental adaptation
04710 Circadian rhythm
107135661 (Arntl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107135661 (Arntl)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107135661 (Arntl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
107135661
NCBI-ProteinID:
XP_015333129
Ensembl:
ENSMMMG00000002502
UniProt:
A0A8C5YQP1
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR
LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTRDKITTNCYKFKIKDGSFITLRSRW
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
LNGGTPDIPSSGLLPGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
AVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccagagaatggacatttcctcgacaatcagtgacttcatgtccccaggcccc
accgacctactctccagctcccttggcaccagtggtgtggattgcaaccgcaagcggaaa
ggcagctccactgactaccaagaaagcatggacacagacaaagatgaccctcatggaagg
ttagaatatacagagcatcagggaaggatcaagaatgcaagggaagctcacagtcagatt
gaaaagaggcgtcgggataaaatgaacagttttattgatgaattggcttctttggtacca
acgtgtaatgcgatgtccaggaaattagataaactgaccgtgctaaggatggccgttcag
cacatgaaaacattaagaggtgccaccaatccatatacagaagcaaactataaaccaacg
tttctatcagatgatgaattgaaacacctcattctcagggcagcagatggatttttgttt
gtcgtaggatgtgaccgagggaagatactctttgtctcagagtctgtcttcaagatcctc
aactatagccagaacgatctgattggtcagagtttgtttgactacctgcaccctaaagat
atcgccaaagtcaaggagcagctctcctcctctgacacagcaccccgggagcggctcata
gatgcaaaaactggacttccagttaaaacagatataacccctgggccgtctcgattatgt
tctggagcacgacgttctttcttctgtaggatgaagtgtaacaggccttcagtgaaggtc
gaagacaaggacttcccctccacctgttcaaagaaaaaagcagatcgaaaaagcttctgt
acaatccacagcacaggctatttgaaaagctggccacccacaaagatggggttggatgaa
gacaatgaaccagacaacgaggggtgtaacctcagctgccttgtcgcaattggacgactg
cattctcatgtggttccccaaccagtgaacggggaaatcagggtgaaatccatggagtac
gtttctcggcatgcaatagatgggaaatttgtctttgtagaccagagggcaacagctatt
ctggcatatttaccacaagaactcctaggcacatcatgttatgaatattttcatcaagat
gacataggacatcttgcagaatgtcataggcaagttttacagacgagagacaagattaca
actaattgctataagtttaaaatcaaagatggttctttcatcacactacgaagtcgatgg
ttcagtttcatgaacccttggaccaaggaagtagaatacatcgtctcaaccaacactgtt
gttttagccaacgtcctggaaggcggggatccaaccttcccgcagctcacagcgtctcct
cacagcatggacagcatgctgccctctggagaaggtggcccaaagaggactcatcctact
gttccagggattccagggggaaccagggctggggcaggaaaaataggtcgcatgattgct
gaggaaatcatggaaatccacaggataagagggtcatcgccttccagctgtggctccagc
ccattgaacattacaagtacgcctccccctgatgcctcctctccaggaggcaagaagatt
ttaaacggagggactccagacattccttccagtggcctactgccagggcaggctcaagag
aacccaggttatccatattctgatagttcttctattcttggtgaaaacccccacataggc
atagacatgatagacaacgaccaaggatcaagtagtcccagtaatgatgaagcagcaatg
gctgtcatcatgagcctgttggaagcagatgctgggctgggtggccctgttgactttagc
gacttgccatggccgctgtaa
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