Marmota marmota marmota (Alpine marmot): 107135704
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Entry
107135704 CDS
T09644
Name
(RefSeq) small nuclear ribonucleoprotein E-like
KO
K11097
small nuclear ribonucleoprotein E
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107135704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107135704
03041 Spliceosome [BR:
mmma03041
]
107135704
03032 DNA replication proteins [BR:
mmma03032
]
107135704
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
107135704
Spliceosome [BR:
mmma03041
]
Complex A
U1 snRNP components
Sm proteins
107135704
U2 snRNP components
107135704
Complex B
U1 snRNP components
107135704
U4/U6.U5 tri-snRNP components
107135704
Complex C
U2 snRNP components
107135704
DNA replication proteins [BR:
mmma03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
107135704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
107135704
NCBI-ProteinID:
XP_048667874
LinkDB
All DBs
Position
Unknown
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEIHSKTKSRKQLGRIMLKGDDITLLQSVSN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccgtggccagggccagaaggtccagaaggtgatggtgcagcccattaacctc
atcttcagatacttgcaaaacagatcccggattcaggtgtggctctatgagcaagtgaat
atgcggatagagggctgtattattggtttcgatgaatacatgaaccttgtattagatgat
gcagaagagattcattctaaaacaaagtcaagaaaacagctgggtcggatcatgctaaaa
ggagatgatattactctgctacaaagtgtctccaactag
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