Marmota marmota marmota (Alpine marmot): 107135797
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Entry
107135797 CDS
T09644
Symbol
Atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04136
Autophagy - other
mmma04140
Autophagy - animal
mmma04211
Longevity regulating pathway
mmma05010
Alzheimer disease
mmma05014
Amyotrophic lateral sclerosis
mmma05016
Huntington disease
mmma05017
Spinocerebellar ataxia
mmma05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107135797 (Atg13)
04136 Autophagy - other
107135797 (Atg13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
107135797 (Atg13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
107135797 (Atg13)
05014 Amyotrophic lateral sclerosis
107135797 (Atg13)
05016 Huntington disease
107135797 (Atg13)
05017 Spinocerebellar ataxia
107135797 (Atg13)
05022 Pathways of neurodegeneration - multiple diseases
107135797 (Atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107135797 (Atg13)
03029 Mitochondrial biogenesis [BR:
mmma03029
]
107135797 (Atg13)
Membrane trafficking [BR:
mmma04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107135797 (Atg13)
Atg1 complex
107135797 (Atg13)
Mitochondrial biogenesis [BR:
mmma03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107135797 (Atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
107135797
NCBI-ProteinID:
XP_015333333
Ensembl:
ENSMMMG00000013875
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYSSSSPMHPCNYRTAGEDAGV
TYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLSSS
RLSYQPAVLGLGSADLAYPVVFAAGLNAQHPHQLMVPGKEGGVPLAPNQPVHGAQADQEK
LAIHTPADVAHCAATPSSSEDTETVSNSSEGRASLHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDTDPMVNPPESPEPVSPLHGSLHSDGSSGGSSGNAHDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagttcattaaatttttt
gccctcaagacagttcaagtgattgtccaggctcgacttggtgaaaagatttgcactcgt
tcatcttcttccccaacgggttcagattggttcaatttagcaatcaaagacatcccggag
gttacacatgaggccaagaaggcactggcagggcagctgcccgccgtggggcggtccatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctggaaatttggtgt
cttgaaatgaatgaaaagtgtgataaagaaatcaaagtttcctacacagtgtacaacagg
ctgtcactgctgctgaagtcccttcttgctataactagggtgacacccgcttacagactc
tcccgaaaacaagggcatgagtatgtcatattgtacaggatatattttggggaagtccaa
ctgaatggcttaggagaaggcttccagaccgttcgtgttgggacagtgggcacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcattcatgtccaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccctat
tccagctcctctcccatgcacccctgcaattacagaactgctggggaggatgctggagtg
acatacccatcagtggaagactctcaagaagtgtgtacgacctctttttccacctcccct
ccatcccagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtg
acggacactctgagggtccccatggcaggactggccttttcccatcaactctcaagctct
cgcctttcctatcagcctgctgtcctgggccttggatcagctgacctggcttatccagta
gtgtttgctgctggcttaaatgctcaacaccctcaccagctaatggttcctgggaaggaa
ggtggggtgccccttgctcccaaccagccagtccatggtgcccaggccgaccaggagaaa
ctggcgatccacactcctgcagatgtggcccactgtgctgccacaccttccagcagtgag
gatactgaaaccgtgtccaatagcagcgagggacgggcctctctccacgatgtcctagag
accatctttgtccggaaagtgggggcttttgtcaacaaacccatcaaccaggtgactctg
acaagtctggacataccctttgccatgtttgctcccaagaatttggagctggaggatact
gatcctatggtgaatcctccagagtccccagagcctgtgtctcctctccatggcagcctg
cactcggatggctccagcgggggcagcagtggcaatgcccacgatgacttcgttatgatt
gacttcaaaccagctttttctaaagatgacattcttccgatggacttggggaccttctat
cgtgaatttcagaacccccctcagctgagcagcctctccatagatatcggggcacaatcc
atggctgaagacttggactcgttaccagagaagctggctgttcatgagaagaacgtccga
gaatttgatgcctttgtagaaaccctgcagtaa
DBGET
integrated database retrieval system
