Marmota marmota marmota (Alpine marmot): 107135984
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Entry
107135984 CDS
T09644
Symbol
Sf1
Name
(RefSeq) splicing factor 1 isoform X2
KO
K13095
splicing factor 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107135984 (Sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmma03041
]
107135984 (Sf1)
Spliceosome [BR:
mmma03041
]
Complex A
Other components
Complex A specific factors
107135984 (Sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
107135984
NCBI-ProteinID:
XP_015333686
Ensembl:
ENSMMMG00000008482
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MESRYNGTEDSDSRNAYCYSPWTYSGTRKSLHRSPSPEPIYNSEGKRLNTREFRTRKKLE
EERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKN
IEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNIL
KQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAG
HIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRP
AAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTG
GHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQG
KGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQ
QNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPP
PPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaagatacaatggaacagaagacagtgattccaggaatgcctactgttattcc
ccctggacttactcgggaacaagaaagagcttacataggtccccttcccctgagcccatc
tacaatagtgaggggaagcgacttaacaccagagagttccgtacccgcaaaaagctggaa
gaggagcggcacaacctcatcacagagatggttgccctcaaccctgatttcaagccacct
gcagattataaacctccagcaacacgtgtgagtgataaagtaatgatccctcaagatgag
tatccagaaatcaactttgttgggctactaattgggcccagagggaacaccctgaagaat
attgagaaggagtgtaacgccaagatcatgatccgggggaaagggtctgtgaaagaaggg
aaggttggacgcaaagatggccagatgttgccaggggaagatgagccacttcatgcccta
gtcactgccaatacaatggagaatgttaaaaaggcagtagaacagatcagaaacatcctg
aagcaaggtattgagaccccagaggaccagaatgatctacggaagatgcagcttcgagaa
ttggctcgcttgaatggtacccttcgggaagatgataacagaatcttaagaccctggcag
agctcagagacccgcagcattaccaatactacagtgtgtaccaagtgtggaggagctggc
cacattgcttcagattgcaagtttcaaaggcctggtgacccccagtcagctcaggataaa
gcacggatggataaagaatatttgtccttgatggctgaacttggggaagctcctgtccca
gcatctgtgggctccacctctgggcctgcgaccacacccttggctagtgcacctcggcct
gctgctcctgccaacaacccgcctccaccgtctctcatgtccaccacccagagccgccca
ccctggatgaattctggcccttcagagagtcggccttatcatggcatgcatggaggtggt
cctggcgggcctggaggtggcccccacagcttcccacacccattacccagcctgacaggt
gggcatggtggacatcccatgcagcacaacccaaatggacccccacccccttggatgcag
ccaccgccaccaccgatgaaccagggcccccacccacctgggcaccatggccctcctcca
atggatcagtacctgggaagtacgcctgtgggctctggggtctatcgcctgcatcaagga
aaaggtatgatgccgccgccgcctatgggcatgatgccgccaccgccgccgcctcccagt
gggcagcccccgccccctccctctggtcctcttcccccatggcagcagcagcagcagcag
cctccgccaccccctccgcccagcagcagtatggcttccagtacccccttgccatggcag
caaaatacgacgactaccaccacgagcgctggcacagggtccatcccgccatggcaacag
cagcaggcggctgccgcagcttctccaggagcccctcagatgcaaggcaaccccactatg
gtgcccctgccccccggggtccagccgcctctgccgcccggggcccctccccctccgccg
cctccgccacctggttccgccggcatgatgtatgccccgccccctcctcctccgcctccc
atggacccttctaactttgtcaccatgatgggcatgggggtggcgggcatgccacccttc
gggatgcctccagctcccccaccgcctccaccacagaactag
DBGET
integrated database retrieval system