Marmota marmota marmota (Alpine marmot): 107136007
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Entry
107136007 CDS
T09644
Symbol
Syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04120
Ubiquitin mediated proteolysis
mmma04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107136007 (Syvn1)
04120 Ubiquitin mediated proteolysis
107136007 (Syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107136007 (Syvn1)
Enzymes [BR:
mmma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107136007 (Syvn1)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107136007 (Syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
107136007
NCBI-ProteinID:
XP_015333729
Ensembl:
ENSMMMG00000009710
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAAAPPSTSAAALSHPSGA
ATTTAAGTGAPAPAPGSAPEASPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTPE
ELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVNPAEETA
SPVVAAASSTSIPSSEATTPSPGASPPAPETEKPPAPESVGAEELPEDGEPDAAELRRRR
LQKLESPVAH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcgctgaccggggccgtggtggct
catgcctactacctcaaacaccagttctaccccactgtggtgtacttgaccaagtccagc
cccagcatggcagtcctgtacatccaggccttcgtccttgtcttccttttgggcaaggtg
atgggcaaggtgttctttgggcagctgagggcagcagagatggagcaccttctggagcgt
tcctggtatgctgttactgagacttgtctggcattcaccgtttttcgggacgacttcagc
cctcgctttgttgcgctcttcaccctcctcctctttctcaaatgtttccactggctggcc
gaggaccgtgtggactttatggaacgcagccccaatatctcctggctctttcactgccga
attgtctcccttatgttcctcctgggtatcctggacttcctcttcgtcagccacgcttat
cacagcatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtatgccatc
ctgatgacaatggtgctcaccatcttcatcaagtatgtgctacactccgtggacctccag
agcgagaacccctgggacaataaagctgtgtacatgctctacacagagctgttcacaggc
tttatcaaggttctgctgtacatggccttcatgaccatcatgatcaaggtgcacaccttc
ccgctctttgccatccgacccatgtacctggccatgaggcagttcaagaaagctgtgaca
gacgccatcatgtcccgccgagccatccgcaacatgaacacactgtatccagatgccact
cctgaggaacttcaggcaatggacaatgtctgtatcatctgccgagaagagatggtgact
ggtgccaagaggctgccctgcaaccacatcttccacaccagctgcctgcgctcctggttc
cagcgacagcagacctgccctacctgccgaatggatgtcctaagagcatctctgccagcc
cagtcaccaccacctcctgagcctgcggatcaggggccaccccctgcccctcatccccca
ccactcctgcctcagccccctaacttcccccagggcctcctgcctccttttcctccaggc
atgttcccgctgtggccccccatgggtcccttcccacctgtcccacctcccccaagctcc
ggagaggctgcagcccctccatccaccagtgcagcagccctttctcatcccagtggagca
gctacaactacagctgctggcaccggtgcccctgccccagcacctggctctgccccagag
gctagccctgccccaggctttcccttccctcctccctggatgggtatgcccctgccgcca
ccctttgccttcccccccatgcctgtgccccctgcgggctttgctgggctgaccccagag
gaactgcgggctctggagggccatgagcggcagcacctggaggcccggctgcagagcctg
cgcaacatccacactctgctcgatgccgccatgctgcaaatcaaccagtatctcactgtg
ctggcctctttggggcccccccggcctgccacttctgtcaaccctgctgaagagactgcc
tctccagtggtcgctgctgcctcctctaccagcatccccagctctgaggctaccacccca
tctccaggagcctccccaccagcccctgaaactgaaaagcctccagctcctgagtcagtg
ggtgccgaggagctgcctgaagatggagagcctgatgctgcagagctccgccgtcgccgc
ctacaaaagttggaatcccctgttgcccactga
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integrated database retrieval system
