Marmota marmota marmota (Alpine marmot): 107136178
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Entry
107136178 CDS
T09644
Symbol
Col6a1
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04151
PI3K-Akt signaling pathway
mmma04510
Focal adhesion
mmma04512
ECM-receptor interaction
mmma04518
Integrin signaling
mmma04820
Cytoskeleton in muscle cells
mmma04974
Protein digestion and absorption
mmma05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
107136178 (Col6a1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107136178 (Col6a1)
04518 Integrin signaling
107136178 (Col6a1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107136178 (Col6a1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107136178 (Col6a1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
107136178 (Col6a1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
107136178 (Col6a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmma04147
]
107136178 (Col6a1)
00536 Glycosaminoglycan binding proteins [BR:
mmma00536
]
107136178 (Col6a1)
Exosome [BR:
mmma04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107136178 (Col6a1)
Glycosaminoglycan binding proteins [BR:
mmma00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107136178 (Col6a1)
Hyaluronan
Extracellular matrix or blood plasma proteins
107136178 (Col6a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
Creatininase
Motif
Other DBs
NCBI-GeneID:
107136178
NCBI-ProteinID:
XP_048659913
LinkDB
All DBs
Position
Unknown
AA seq
881 aa
AA seq
DB search
MRLAHALLPLLLQAWWVAAQDIPETARAIAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKSFTKRFIDNLRDRYYRCDRNLVWNAGALHYSDEVEIIRGLTRMPSGRDELKASVDAV
KYFGKGTYTDCAIKKGLEELLIGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGIKVFSVAITPDHLVSGPSLLCPEHVGGRHLHTDPAQPTMLGTCQDPGAAMGKINVEQ
VCCSFECQPARGPPGPRGDPGYEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKG
SRGEKGSRGPKGYKGEKGKRGIDGVDGMKGETGYPGLPGCKGSPGFDGAQGPPGPKGDAG
AFGLKGEKGAPGADGEAGRPGNSGPPGDEGEPGEPGPPGEKGEAGDEGNTGPDGPPGERG
GPGERGPRGTPGMRGPRGDPGEAGPQGDQGREGPVGIPGDPGEAGPIGPKGYRGDEGPPG
SEGLRGAPGPAGPPGDPGLMGQRVSVKSTAVWAAVQASRSPGGPSPGLSYLWGRACLAHF
SGRAVKKLQWMAGGTFTGEALQYTRDRLLPPTQNDRIALVITDGRSDTQRDTTPLSVLCG
PDIQVVSVGIKDVFGFVASSDQLNVISCQGLSSPGRPGISLEKENYAELLDDAFLKNITA
QICIDKKCPDYTCPVTFSAPADITILLDGSASVGRHNFDTTRHFAKRLAERFLSAGRADP
SQDVRVAVVQYSGPGQQRPGRGALQFLQNYTVLASVVDSMDFFNDATDVNDALSYVTRFY
REASSGAAKKKVLLFSDGNSQGATAAAIEKAVQEAQRAGIEVFVVVVGHQVNEPHIRVLV
TGKTAEYDVAFGERHLFRVPSYQALLRGVFYQTVSRKVAQG
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggcccatgccctgctgcccctgcttctgcaggcctggtgggtggccgcccag
gacatccctgagaccgcgagggccattgccttccaagactgccctgtggacctgttcttt
gtgctggacacctctgagagtgtggccctgcggctgaagccctatggggccctggtggac
aaggtgaagtccttcaccaagcgcttcattgacaacctgagagacaggtactaccggtgt
gaccgcaacctggtgtggaacgcgggtgccctgcactacagcgacgaggtggagatcatc
cgcgggctcacacgcatgcccagcgggcgcgatgagctcaaggccagcgtggacgctgtc
aagtacttcggcaagggcacctacactgactgtgccatcaagaaggggctggaggagctg
ctcatcgggggctcccacctgaaggagaacaagtacctgattgtggtgaccgatgggcac
ccactggagggctacaaggagccgtgcgggggcctggaggacgccgtgaatgaggccaaa
cacctgggcatcaaggtcttctccgtggccattacacccgatcacctggtgagcggcccg
tctctcctgtgccctgaacacgtgggcgggcgccacctgcacacagatcccgcgcagccc
accatgcttggcacctgccaggaccctggtgcggccatgggaaaaatcaacgtggagcaa
gtgtgctgctccttcgagtgccagcccgccagaggaccacccgggccccggggcgaccct
gggtatgagggagaacgaggcaagccaggcctcccaggagagaagggagaagccggagac
cctggaagacccggggacctcgggccagtcgggtaccaggggatgaagggagagaaaggg
agccgtggggagaagggctccaggggacccaagggctacaagggtgagaaaggcaagcga
ggcattgacggagtggatggaatgaagggggagacggggtacccaggccttccaggatgc
aagggctcgccagggtttgatggcgctcaaggtccccccggccccaagggagatgccggc
gcctttggcctgaagggagagaagggtgcacctggagcggatggggaggctgggagaccc
ggaaactcagggccaccgggagacgagggtgagcctggagagcctggtccccctggggag
aaaggagaggctggtgacgaggggaacacaggaccggacggcccccctggagagaggggt
ggccctggagaacgaggacctcgggggaccccaggcatgcgggggccaagaggagaccca
ggtgaagctggaccccaaggagaccaagggagagaaggccccgtgggcatccctggagac
ccgggtgaggctggccccattggacctaaaggataccgaggtgacgagggtcccccaggg
tctgagggtctcagaggagccccaggacccgctggcccccctggagacccggggctgatg
ggccaaagggtgagtgtcaagagcacagccgtgtgggctgctgtccaggcgtccagaagc
cctggaggccccagccctggcctgagttatctctggggaagggcttgcctggcccacttc
tccggcagagccgtcaagaagctgcagtggatggcgggtggcacctttacaggcgaggcc
ctgcagtacacccgggaccggctgctgccacccacccagaatgaccgcattgccctggtc
atcactgatggacgctcggacacccagagggataccactccactcagcgtgctctgtggc
cccgacatccaggtggtctctgtgggcatcaaggacgtgtttggctttgttgcgagctct
gaccagctcaacgtcatttcctgccaagggctgtcgtccccgggccggccgggcatctcc
ctggagaaggagaactatgcagagctgctggatgatgccttcctgaagaacatcacggcc
cagatatgcatagacaagaagtgtccagactacacctgcccagtcaccttctccgcccca
gccgacatcaccatcctgctggacggctcggccagcgtgggccgccacaacttcgacacc
accaggcacttcgccaagcgcctggcagagcgcttcctgtccgccggccgggcggacccc
tcgcaggacgtgcgggtggcggtggtacagtacagcggccctggccagcagaggcctggg
cggggcgcactgcagtttctgcagaactacaccgtgctggccagcgtggtggacagcatg
gatttcttcaatgatgccaccgacgtcaacgatgccctgagctatgtcacacgcttctac
cgggaggcctcctcaggagccgccaagaagaaggtgctgctgttctcggacggcaactcg
cagggggccacggcggcggccatcgagaaggccgtgcaagaggcccagcgggcgggcatt
gaggtctttgtggtggtggtgggtcaccaggtgaatgagccccacatccgcgtgctggtc
actggcaagacagccgagtacgacgtggccttcggagagcgccacctgtttcgcgtgccc
agctaccaggccctgctgcgtggtgtcttctaccagacagtgtctaggaaggtggcgcag
ggctag
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