Marmota marmota marmota (Alpine marmot): 107136410
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Entry
107136410 CDS
T09644
Symbol
Ss18l1
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03082
ATP-dependent chromatin remodeling
mmma05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107136410 (Ss18l1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
107136410 (Ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmma03036
]
107136410 (Ss18l1)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107136410 (Ss18l1)
GBAF(ncBAF) complex
107136410 (Ss18l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
107136410
NCBI-ProteinID:
XP_015334148
Ensembl:
ENSMMMG00000004657
UniProt:
A0A8C5YVL1
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MPCGCSEEALVPRPRSHPRLLQMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYL
ATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDAISTGLPPASLMQG
QIGNGPSHVSMQQTVQSTLPTTSMSMSGSGHGSGPGYSHSGPASQSVPMQGQGAISNYVS
RTNINMQSNPVSMMHQQAATSHYSSAQGGSQHYQGQSSMAMMGQGGQGSSMMGQRPMAPY
RPSQQGSAQQYLGQEEYYSEPYGHSQAASEPMSQQYYPEGHSDYAYQQSSYSEQSYERSF
EESTQHYYEGGNSQYSQQQAGYQQGTAQPQTYSQQQYPNQQSYPGQQQAYGPAQSAPSQY
SSYQQGQGQQYGGYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtggttgctccgaggaagccttggtgcccaggccccgttcacacccacgtctg
ctgcagatgctggacgagaaccaccacctgatccagtgcatcctggactaccagagcaag
ggcaagacggcggagtgcacccagtaccagcagatcctgcaccggaacctggtctacctg
gccaccatagccgactccaaccagaacatgcagtcgctgctgcccgccccgcccacccag
aacatgaacctgggccccggagcactgagccagagcggttccagccagggcctgcacccc
caaggcagcctcagcgacgccatcagcacaggcctgcccccggcctccctcatgcagggc
cagatcggcaatggtcccagtcacgtgtccatgcagcagacggtgcagagcaccctgccc
acaacttccatgagcatgtctggtagtggccacggctcgggacctggttacagccactcg
ggacctgcctctcagagcgtccccatgcagggccagggcgccatcagcaactacgtgtct
cggaccaacatcaacatgcagtccaacccagtctccatgatgcaccagcaggcggccaca
tcccactacagctctgcgcagggcgggagccaacactaccagggccagtcgtccatggcc
atgatgggccagggcggccagggcagcagcatgatggggcagcggcccatggcgccctac
cggccctcccagcaaggctctgcgcagcagtacctgggccaggaggagtactacagcgag
ccgtacggccacagccaggccgcctcggagcccatgagccagcagtactaccccgagggc
cacagtgactatgcctaccagcagtcgtcctactcggagcagagctatgagcgctccttc
gaggagtccacgcagcactactacgagggggggaactcccagtacagccagcagcaggct
gggtaccagcagggcaccgcccagccgcagacctactcccagcagcagtaccccaaccag
cagagctaccccgggcagcagcaggcctacgggcctgcccagagtgccccctcgcagtac
tccagctaccagcaaggacaaggccagcagtacgggggctaccgagcatcgcagacggga
ccctctgcccagcagcagcggccttatggctatgagcagggccagtacggaaactaccag
caatga
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