KEGG   Marmota marmota marmota (Alpine marmot): 107136532
Entry
107136532         CDS       T09644                                 
Symbol
Sdc4
Name
(RefSeq) syndecan-4
  KO
K16338  syndecan 4
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma04512  ECM-receptor interaction
mmma04514  Cell adhesion molecule (CAM) interaction
mmma04820  Cytoskeleton in muscle cells
mmma05205  Proteoglycans in cancer
mmma05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107136532 (Sdc4)
   04514 Cell adhesion molecule (CAM) interaction
    107136532 (Sdc4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107136532 (Sdc4)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    107136532 (Sdc4)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    107136532 (Sdc4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:mmma00535]
    107136532 (Sdc4)
Proteoglycans [BR:mmma00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   107136532 (Sdc4)
SSDB
Motif
Pfam: Syndecan DUF8063 PARM
Other DBs
NCBI-GeneID: 107136532
NCBI-ProteinID: XP_015334325
Ensembl: ENSMMMG00000005139
LinkDB
Position
Unknown
AA seq 200 aa
MSPARALALWLLLCVGVSAASAESIRETEVIDPQDLLEGQYFSGDLPDDEDVGGPGQEPD
DFELSGSGDLDDLGDPRIFPEVIHPLVPLDNHIPERAGPGNRAPSETKELEENEVIPKRS
SPFEEDVSNKVSMSSTAQSSNIFERTEVLIALTVGGIVGILFAVFLVLLLVYRMKKKDEG
SYDLGKKPIYKKAPTNEFYA
NT seq 603 nt   +upstreamnt  +downstreamnt
atgtcgcccgcccgcgcgctcgcgctctggctgctcctctgcgtaggcgtctccgcagcc
tcggccgagtcgatccgagaaactgaggtcatcgacccccaggacctcctggaaggccaa
tacttctctggagacctacctgatgatgaggacgttggggggcctgggcaggaacctgat
gactttgagctgtccggctctggagatctggatgacttgggggaccccaggatcttccct
gaagtgatccatcccttggtgcctctagataaccacatccctgagcgggcagggcctggg
aaccgggccccctctgaaactaaggagctagaagagaacgaagtcatccccaagaggagc
tcgccctttgaggaggatgtgtccaataaggtgtccatgtccagcactgcccagagcagc
aacatctttgagagaaccgaggtcctgatagcgctgactgtgggcggcatcgtgggcatc
ctgttcgccgtgttcctggtcctgctgctggtgtaccgcatgaagaagaaggacgaaggc
agctacgacctgggcaagaagcccatctacaaaaaggcccccaccaacgagttctacgcc
tga

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