Marmota marmota marmota (Alpine marmot): 107137005
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Entry
107137005 CDS
T09644
Symbol
Msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma01524
Platinum drug resistance
mmma03430
Mismatch repair
mmma05200
Pathways in cancer
mmma05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107137005 (Msh2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107137005 (Msh2)
09162 Cancer: specific types
05210 Colorectal cancer
107137005 (Msh2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
107137005 (Msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107137005 (Msh2)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107137005 (Msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_III
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
107137005
NCBI-ProteinID:
XP_015334872
Ensembl:
ENSMMMG00000009438
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVIKYLGPAGAKTLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDTIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECILPGGETAGDMGKLRQVIQRGGILITERKRTDFSTKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAIIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKKRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQVLLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREVMDDLEKKMQSTLISAARDLGKNGS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaaccgaaggaaacgctgcagttggaaagcgcggccgaggtcggcttcgtg
cgcttcttccagagcatgccggagaagccgaccaccaccgtgcgcctcttcgaccggggc
gacttctacacggctcacggcgaggacgcgctgctggccgcccgagaggtgttcaagacc
cagggggtgatcaagtacttgggtcctgcaggagcaaagactctgcagagtgttgtgctt
agtaaaatgaattttgaatcttttgtaaaagatcttcttcttgttcgtcagtatagagtt
gaagtatataaaaacagagctggaaataaggcatccaaggagaatgattggtatttggca
tttaaggcttctcctggcaatctttctcagtttgaagacattctgtttggtaacaatgat
atgtcagcttccattggtgttgtgggcgttaaaatgtccacagttgatggtcaaagacag
gttggagttgggtatgttgataccatacagaggaagctaggactgtgtgaattccctgat
aatgatcagttttccaatctggaggctctcctgattcagattggaccaaaggaatgtatt
ttaccaggaggagagactgctggagatatggggaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagaactgacttttccacaaaagacatttatcaggat
ctaaatcggttgttgaaaggcaaaaagggagaacagatgaacagtgctgtcttgccagaa
atggagaatcaggttgcagtttcatcattgtctgcgataattaagtttttagaactctta
tcagatgattcaaattttggacagtttgaactgactacttttgacttcagccagtacatg
aaactggatattgcagcagtgagagctcttaaccttttccagggttctgttgaagatact
tctggctctcagtctctggctgcattgctgaataaatgcaaaactcctcaaggacaaaga
ctggttaaccagtggattaagcagcctctcatggataagaagagaatagaagaaagatta
aatttagtggaagcttttgtagaagatgcagaattgagacaaagtttacaagaagattta
cttcgccgattcccagatcttaaccgacttgccaagaaatttcaaagacaagcagcaaac
cttcaagattgttaccgactctatcagggcataaaccaactccctaatgttatacaggct
ctggaaaaatacgaaggaaaacaccaggtgttgttgttggcagtttttgtgactcctctt
attgatcttcggtctgatttctccaagtttcaggaaatgatcgaaacaactttagatatg
gatcaggtggaaaaccatgagttccttgtaaaaccttcatttgatcctaatctgagtgaa
ttaagagaagtaatggatgacttggaaaagaagatgcagtccacattaataagtgcagcc
cgagatcttggtaagaatggaagttaa
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