Marmota marmota marmota (Alpine marmot): 107137373
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Entry
107137373 CDS
T09644
Symbol
Spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107137373 (Spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mmma04812
]
107137373 (Spast)
Enzymes [BR:
mmma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
107137373 (Spast)
Membrane trafficking [BR:
mmma04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
107137373 (Spast)
Cytoskeleton proteins [BR:
mmma04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
107137373 (Spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
AAA_16
AAA_14
Mg_chelatase
MIT
IstB_IS21
DUF815
AAA_24
nSTAND3
NPHP3_N
AAA_2
DUF4368
DUF2515
Motif
Other DBs
NCBI-GeneID:
107137373
NCBI-ProteinID:
XP_015335277
Ensembl:
ENSMMMG00000018838
UniProt:
A0A8C6EX19
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MSSPGGRGKKKGSGGPSSPVPPRPPPSCQAPAPHAAGPAPPPRSPHKRNLYYFSYPLIVG
FALLRLVAFHLGLLFVWLCQRFSRALMAAKRSSRAAPTPASASPPAPEPGGEAEHVRAFH
KQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAK
MMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNDNTNLTCRNGHLQSESGAVPKRKDPLT
HASNSLPRSKTVLKTGSTGLSGHHRAPSCSGLSMVSGARQGSGPAAATHKGTPKTNRTNK
PSTPTTAPRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVIL
PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE
KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV
LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM
TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT
LEAYIRWNKDFGDTTV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccgggtggacgagggaagaagaaaggctccggcggccccagcagcccggtg
cctccgaggcctccgccctcctgccaggcccccgcccctcacgctgccgggccggcccct
ccgccccggtcgccgcataagcggaacctgtattacttctcctacccgctcatcgtaggc
ttcgcgctgctgcgtctggtggccttccacctggggctcctcttcgtgtggctctgccag
cgcttctcccgcgccctcatggccgccaagaggagctcccgggccgcgccgacgccagcc
tctgcctcgccccctgcacccgagccgggtggcgaggccgagcacgtccgggccttccac
aaacaggccttcgagtacatctccattgccctgcgcatcgatgaggacgagaaagcagga
cagaaggagcaagctgtggaatggtataagaaaggtattgaagaactagaaaaaggaata
gctgttatagttacaggacaaggtgaacagtgtgaaagagctagacgccttcaagctaaa
atgatgactaatttggttatggccaaggatcgtttacaacttctagagaagctgcaacca
gttttgcaattttccaagtcacaaacggacgtctataatgacaatactaacttgacatgc
cgaaatggacatcttcagtcagaaagtggagctgttccaaaaagaaaagatcccctaaca
catgctagtaattcactgcctcgttcaaaaactgttctgaaaactggatccacaggtctt
tccggtcaccacagagcacctagttgcagtggtttatccatggtttctggagcaagacaa
ggatctggtcctgcagctgccactcataagggtactccgaaaacaaatagaacaaataag
ccttctacccctacaactgctcctcgtaaaaagaaagacttaaagaattttaggaatgtg
gacagcaaccttgctaaccttattatgaatgaaattgtggacaatggaacagctgttaaa
tttgatgatatagctggtcaagagttggcaaaacaagccttgcaagaaattgttattctt
ccttctctgagacctgagttgttcacagggcttagagctcctgccagaggattgctactc
tttggtccacctggaaatgggaagacaatgctggctaaagcagtagctgcagaatctaat
gcaaccttttttaatataagtgctgcaagtttaacttcaaaatatgtgggggaaggtgag
aaattggtgagagctctttttgcggtggctcgagaacttcagccttctataattttcata
gatgaagttgatagccttttatgtgaaagaagagaaggggagcatgatgctagtagacgt
ctaaaaactgaatttctaatagaatttgatggtgtacagtctgctggagatgacagagta
cttgtaatgggtgccactaacaggccacaagaacttgatgaggctgttctcaggcgtttc
atcaaacgggtatatgtgtctttaccaaatgaagagaccagactacttttacttaagaat
ctgttatgtaaacaaggaagcccactgacgcaaaaagaactagcacaacttgctagaatg
actgatggatactcaggaagtgatctaacagctctggcaaaagatgcagcactgggtcct
atccgagaactgaaaccagaacaggtgaagaatatgtctgccagtgagatgagaaatatt
cgattgtctgacttcacggaatccttgaaaaagataaaacgcagtgtgagtcctcaaacc
ttagaagcgtacatacggtggaacaaggactttggagataccactgtttaa
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